Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01266 ATGAAGCAGTTGATCCGTCGCCTCTCGCGCGTCGCTGACTCCTCCAATTACACGCTCCTAAGCTCGGACTCCTACTCCTCCTCCTCCTCCTCCTCCTCGTCGCGGAGCTGCCGGCGGCGCCACCGGGCGGAGTCGTTCCGAGCCTCCAAGATCCGCCGCTCCTCCGCGGTGGTGCCGGAGGGGCACGTGCCGATCTACGTCGGTGACGAGATGGAGAGGTTTGTGGTGTGCGCTGAGCTCCTCAACCACCCTGTCTTCGTCAAACTACTCAACGAATCCGCGCAGGAATACGGCTACGAACAGAAAGGCGTGCTCCGGTTGCCGTGCCGCGTCTTCGACTTTGAGCGCGTGCTTCACGCGCTCCGCCTTGGCCTCGACGCGCATGACGTCTCCGAGCTCGTTAACTTCTCGCCGGAAGAATTCTCCTGA 429 0.627 MKQLIRRLSRVADSSNYTLLSSDSYSSSSSSSSSRSCRRRHRAESFRASKIRRSSAVVPEGHVPIYVGDEMERFVVCAELLNHPVFVKLLNESAQEYGYEQKGVLRLPCRVFDFERVLHALRLGLDAHDVSELVNFSPEEFS* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01266 142 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 118 IPR003676 GO:0009733
Lapu5g01266 142 Pfam Auxin responsive protein 28 121 IPR003676 GO:0009733
Lapu5g01266 142 MobiDBLite consensus disorder prediction 21 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01266 Lapu-Chr5 25410232 25410660 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01266 1 121 Calmodulin-binding Proteins AT2G24400 31.405 4.48e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01266 K14488 - gmx:100793103 200.29