Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01264 ATGGTAGCAACTAAAAGGTTCTCAGTGGAAAACAAGTTAGGAGAAGGGGGCTTTGGACCTGTATATAAGGGATTATTACCCAAGGGAGAAGAAATAGCAATAAAAAGAATTTCGGAAGGTTCAGGGCAAGGAGACACTGAGTTTGAAAATGAATTAACTCTCATATCTGAACTCCAACACATGAGTCTTGTTCAGTTGTTGGGTTGCTGCATTCATGGAGATGAAAGAGTGCTAATCTACAATAAATACATGTCACCTGAGTATGCCATGGAAGGAATTTTCTCTTTCAAATATGATGTCTATGCTTTTGGAGTCTTGCTACTTGAAATTACCAGTGGCAGAAGGAACAATGTTGATTGGCCACTCAATCTAGTTGGACATGCTTGGGAGCTATGGAAACAAGGCCATGCACTAGACCTCTTAGATCCAAATTTAAGAGAATTATTCATTCAAGAGGAAGCATTAAGATGCATTCATGTTGGTCTTCTATGTATAGAAGAATGTGTAGCTAAGCGTCCAAACATTTCAGAGATAATCTCCATGTTAAGTAGTGACATTGCAACACTTCCATTGCCTAGAAGACCAGCATAG 591 0.3909 MVATKRFSVENKLGEGGFGPVYKGLLPKGEEIAIKRISEGSGQGDTEFENELTLISELQHMSLVQLLGCCIHGDERVLIYNKYMSPEYAMEGIFSFKYDVYAFGVLLLEITSGRRNNVDWPLNLVGHAWELWKQGHALDLLDPNLRELFIQEEALRCIHVGLLCIEECVAKRPNISEIISMLSSDIATLPLPRRPA* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01264 196 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 83 195 - -
Lapu5g01264 196 Pfam Protein tyrosine and serine/threonine kinase 9 80 IPR001245 GO:0004672|GO:0006468
Lapu5g01264 196 Pfam Protein tyrosine and serine/threonine kinase 82 181 IPR001245 GO:0004672|GO:0006468
Lapu5g01264 196 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1 82 - -
Lapu5g01264 196 ProSiteProfiles Protein kinase domain profile. 7 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01264 196 SUPERFAMILY Protein kinase-like (PK-like) 2 191 IPR011009 -
Lapu5g01264 196 Gene3D Transferase(Phosphotransferase) domain 1 82 186 - -
Lapu5g01264 196 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01264 Lapu-Chr5 25304879 25306174 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01264 1 196 Receptor kinase-like Gene Family AT4G23280 34.426 3.39e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g01264 PK_Tyr_Ser-Thr 1e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01264 - - gmx:100802852 230.335