LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu5g01261	ATGATTTGTGGCTTCATCAACGAACAGCGAACTATTGAAAACGGTATCGCCCCTGAGGTTTTCCATGGATTTGTATTTGGCTTCCCTCAAAACTGGGAAAGCTATGCTCTAAATTTCTCGAGAGAAGAATCAACCACTGGTACTGATTTGGGTAGTGCTTTTCTTGATGACATACCAGCTAGCTGTCCAGAAATTCCATCTGATGGTGCGGAAAATTGTATTCGTACTGCTTTGGTATCACCAGAGGAGGCACCGGGAGAGCACGAAAAGCAATTCCCCGGACATGATTGCAATGTGTCAAAAGCGACTGGTGGGGTTAATCTTGTTTGTAGTGGTGGTGGGAAAAGATGTAGTGCCAGGTTGCATGATATTAAAGTAGGCCTGCAGAAGAAGCAGGTTGCTTCTGCTGGTATTTCGAAGCATCCAGATAACGAGGAGAACTCTTCTTCAGTGGCCTTTGAGAATTGTGATATAGAGGGATTGCGAAGTCCGGCAACACCCATTCAGTCACAATCGAGAAATGAACATTCAATCGATGCTCGTGTGGAAAATTGTATTCCTCCTCTTTTGGCATCACCGGAGAAGGCCCAGGGTGATCACGAGACGGCATTCCCTGAAAATGAATACGACGTGTCAAAGAAGGTGGGTGGACTTAATGTTACTTGTGGTAGAGGTGGGAAAAGACGAAGTGAAAATCCAAAAAATCCGGAAACACCTATTCAGTCACAATCACGGAGACAGCTACGCACATCATCTGAACAGATAGTTAAAAAATCTGAATCCAGAATTTCTACAACATTGTCACCCAAGTTGGAAAAAAATAAGAAAAAGGTGGGCATGTCTAAGGGAATACGGAATAAATCTGCTTCTGCTGTGAAAAAATCGCGATTGAAAGATCAAAGTCATTTGACCAAAGGAAGCCAGCAAAAAATATCCATTGCTTCTCCTGAGTCATCGAGTTTCAGAACATCCAGATCTGGCAGGTTGCTTCTACCTCCCCTAGAGTTTTGGCGCAATCAAATACCAATTTATAATGCGGATCATGAGCTTAAAGAAATTCAGGATGGTGAATCTCTGATATCACCTTGTAGAGTTTCTTCACCGTCATTGAGCAGGTTTGCCAATCGGAAACGTGCAGCGTGA	1143	0.4348	MICGFINEQRTIENGIAPEVFHGFVFGFPQNWESYALNFSREESTTGTDLGSAFLDDIPASCPEIPSDGAENCIRTALVSPEEAPGEHEKQFPGHDCNVSKATGGVNLVCSGGGKRCSARLHDIKVGLQKKQVASAGISKHPDNEENSSSVAFENCDIEGLRSPATPIQSQSRNEHSIDARVENCIPPLLASPEKAQGDHETAFPENEYDVSKKVGGLNVTCGRGGKRRSENPKNPETPIQSQSRRQLRTSSEQIVKKSESRISTTLSPKLEKNKKKVGMSKGIRNKSASAVKKSRLKDQSHLTKGSQQKISIASPESSSFRTSRSGRLLLPPLEFWRNQIPIYNADHELKEIQDGESLISPCRVSSPSLSRFANRKRAA*	381

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu5g01261	380	MobiDBLite	consensus disorder prediction	235	250	-	-
	Lapu5g01261	380	Pfam	SANTA (SANT Associated)	2	35	IPR015216	-
	Lapu5g01261	380	MobiDBLite	consensus disorder prediction	191	210	-	-
	Lapu5g01261	380	PANTHER	KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG	2	356	-	-
	Lapu5g01261	380	MobiDBLite	consensus disorder prediction	215	325	-	-
	Lapu5g01261	380	MobiDBLite	consensus disorder prediction	304	325	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu5g01261	Lapu-Chr5	25274639	25281149	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Lapu5g01261		SANTA	4.6e-06	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu5g01261	-		-	gmx:100790080	432.18