Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01252 ATGGCGGCGCCGAATAGAATAGAACGCGCTCACCAGATGTACCGTGAAGGACGATACGAGGAGGCGTTAGGGTTCTACACGGAGGCAATCGCCATTGCCAAGACTAACCCTCAGAAGATCGCGTTGCATAGCAATCGAGCTGCGTGCTATCTGAAGCTTCACGATTTCAAGAAGGCAGCAGAAGAGTGTACCTCAGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTACGGGCTCAAACGCTAGTCACCCTGAAGGAGTACCATTCAGCTCTTTTTGATGTCAACAGACTGTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAGGCACGCTTGAAAACCCAGTTGCTGGTAGTAAGATATGTTTTTCTCTCTCTCTATATTCTTGCTCAAGGAAAGTCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTGAAGAACAGGTAGACGAGGAGCCTGACGTGATAACAGAAGGGGAGAATGAAAAAGAAGAGATGGGAGAGAAATATTCTTCTGTTTCTAATATTAGGACAGAACAGAAGGATGAACTTGGTAAAAGCATTATTAGTACTGAGTGCGCTGCTCATGAAGCAGACCTCAAGTTTTCACTGAAGCAAGGGAGAAACCAATACCATGACACTAAGAAGTTCACAGCAGATGCCATAGCTCCTAAAGCACCAAACAGGGAATCAAGTGAGCAACATTCAAAAGGATGGCAAACAATTCCAAAACCGAAAGGACATTCAGCTCTAGATTATGCACGGTGGAATAGTGTTGAAGATGATTCCAGTGATGACGACGATGACAATGAAGAAGAAGAATCTTTGCCTCAGTATCGGTTTCGTGTAAGAACAATTGGTGTTCGTCCTGTAAAGTGA 894 0.4441 MAAPNRIERAHQMYREGRYEEALGFYTEAIAIAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLLVVRYVFLSLYILAQGKSLAPIPESEEEFEEQVDEEPDVITEGENEKEEMGEKYSSVSNIRTEQKDELGKSIISTECAAHEADLKFSLKQGRNQYHDTKKFTADAIAPKAPNRESSEQHSKGWQTIPKPKGHSALDYARWNSVEDDSSDDDDDNEEEESLPQYRFRVRTIGVRPVK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01252 297 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 297 - -
Lapu5g01252 297 MobiDBLite consensus disorder prediction 165 182 - -
Lapu5g01252 297 SUPERFAMILY TPR-like 7 119 IPR011990 GO:0005515
Lapu5g01252 297 MobiDBLite consensus disorder prediction 226 284 - -
Lapu5g01252 297 SMART tpr_5 74 107 IPR019734 GO:0005515
Lapu5g01252 297 SMART tpr_5 40 73 IPR019734 GO:0005515
Lapu5g01252 297 SMART tpr_5 3 36 IPR019734 GO:0005515
Lapu5g01252 297 MobiDBLite consensus disorder prediction 144 182 - -
Lapu5g01252 297 Gene3D Tetratricopeptide repeat domain 2 123 IPR011990 GO:0005515
Lapu5g01252 297 Pfam Anaphase-promoting complex, cyclosome, subunit 3 17 94 - -
Lapu5g01252 297 MobiDBLite consensus disorder prediction 146 164 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01252 2 121 Calmodulin-binding Proteins AT3G25230 32.576 2.34e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01252 - - gmx:100792046 466.463