Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01227 ATGAAATCTGGCAGAGACAAAGAGAAAGAGAACGATCGCTGCATCAGTTCGCATACGCTGACCCTCCATCGCCGTCTTCTGCACGCCCTAAACCTTGGCACCAGACATTTTGATGAGAAGACAAATAGGTGGAGGTGGCAGTGCGCTAACATTGAAGTGCAGAAAAATGCACTACGATCAATCGGTGCGTTTCTTGATTCCTTATCGGGAGATGCACGTGCAGCACGTCATGCTGTTGTTAAGGAATCTGTTCCTGATATTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGAGGCCTTATTAAGCATGGCATCAAATGTTGCAGTGAAGTTAGTTAGCGTTCTACCTAATCCATTCTTTCAATCACATATGTTGGAACTTGTTTATTGTCTGTCATCCTTGCTATCTTCACATCAAGTAGAAGTTGCTATACCCTGTGCTACCGCCTTGAATTTGGTAATCTCAAATTTGAGTGCTACAAGTGAGAAGGAAGTTATGGAAGCATTGAAAGAAACAGAGACTTCCATTCGGATTGTGGCAAATATAAAAGATTTTGCTGAAGGTGCAAAAATTGAATATTTCGAAGAAATGACTTTACTTTTGAGCACTATACTTTGGCGCTGGCCTCTGTCTAGGTTCCGTGTTTGTAATGATGCAATATTTATGAAAGGTTTAGCAAACATCCATACAAAGACAGATAGTTCTATTAAACTTGCCCTTCTAAAGTTGTACACGTCTATAGCTTTATGTGATTCTGCAGCAAGAAAGCTTATAGAGGATGGAGAAGTATTTCCACAAATGTTTGTGCAGGCAATGGGAAAATCAAACCCTCATGCTATTCGGATAGAGGGGTTTAGGCTTGCTCAATGCCTATTGAGATCCCAAGATAATTGTTTAAAAGTGGTTGGTTTGTGTGGTGAAGCTCTTGTTGAGGCCATAGTTTGTGGAATGAAAGAAACTAGTCTGAGTTCTAAAAAAGTTGGGAACAACCATGGGTCTTTGTCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGCAGGTGATCATCATACCAATTTTTGGAAACAAGGAATTGATAGAGTCCTCCTTAATCTTGTAATTGAAAATATTGAAGACCAATTGTTTGGACCTGTCCTGTCTTTGGAAAAACAAATATATATGGCAAAAGAGGGATTAAAAGCCAATTATCATCTTGGTCTTAGGAGTTATGTGTGGGACATTCTTGGGTGGCTTACAATTCATTGTGGAGAAAATTTAAACCCTAATACTCATGGTAGTGAGCTCTGCATCAACTTGCTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCAGAATCTGTCAAAAGGATATTGATGATCATTTTCAAAGTGAACCGGTATCAAGGGCTGTTCTAATGATGATTCATTCTCCATGTAATTCCATCTCCTCGCATACTAGATTCTTATTGTCAGATGTACTAAAGGTGAAAGGCATGTCATGCTTGAAAAGCTTACTACATACTTTAGATTATACGTCATCCTTAGAAAGCTATGGATCATTTGATAAACTTCAGCTTGTTGTTAATTTAATTGGGTTTACTTGTCTTTCAAGCTTACCACAGTATCAAAGATGTATCATTGAGAGCAAAGGGATAAAGGTGATTGTTCTTCTCATGAAGCGATGCTTAAATAATGACATTCATATTGAAAGGAAAAGCTTTGCTTCTCATTTGCATACAACATGCCATGAAAGGTCTTGTTGCTGTTATGATAAACAAGATTGGGAAGGTTCCAATATTCTCTTATTTTATAGTTTGTTGGGCTTAACTGAAATTCTTCATCAGTGTGACCTTTTACAAGATAATCCTCAGCAATTTTCTAGAGAGGTGACAAACATTAAACCACAGTTAGTTAGCAAACTTCAAGAGATCTGTAAAAGCAACTCTTTTAGTCCTGGTGTGAGATGGTATGTTTCTTATATTCTAACTTATTTTGGATACTACGGTTTCCCAAATGAATTAGCCAAAAGGATTGGGAAATATCTCAATAAAGAAGAATACTCGGATATGAAGCTTGTTGTAGCAAATGGGGAATCTCTGAGTGTTCATGATGTTATTCTTGTTGTTCGATGTCCATCACTACTGCCTCCTCAATTGTTACCTTGTAGGAAGAGTTCTAAAGAGATAGCAGATAAGTTTGTCAGAGAGACCATGACAGAAGTTCGATTATCTTCTCATGTTGATTATGAAGCATTGGCATTGTTGTTGGAATATGTGTATTTGGGATGCGTACATGCCAACGAAGAAACAGCAAAGAAGCTGAAAATTCTTGCTAAGCGCTGCAATCTACATCCTTTGTTCCAAATGCTTCACAGACAACGTCCAAAGTGGGGCACCCCTTTCCCCAGTTTCGATCTTACTTCATCTTTTGGTTTAGCTGGAAATTGTTTTTCGGATGTCATATTGGAAGCTAAATCAAATGAGCTTGTCGAGTGGACATGCAATATTTGTTCTGACACAGTACCTCATGTGCATGCTCACAAAATTATATTGCAGTCTGGTTGTGATTATCTACTAGGTTTGTTCCGGTCAGGAATGCAAGAAAGGCATCTGAAGGGCCTGAGCTGA 2634 0.3861 MKSGRDKEKENDRCISSHTLTLHRRLLHALNLGTRHFDEKTNRWRWQCANIEVQKNALRSIGAFLDSLSGDARAARHAVVKESVPDILGALLWILQCKSEALLSMASNVAVKLVSVLPNPFFQSHMLELVYCLSSLLSSHQVEVAIPCATALNLVISNLSATSEKEVMEALKETETSIRIVANIKDFAEGAKIEYFEEMTLLLSTILWRWPLSRFRVCNDAIFMKGLANIHTKTDSSIKLALLKLYTSIALCDSAARKLIEDGEVFPQMFVQAMGKSNPHAIRIEGFRLAQCLLRSQDNCLKVVGLCGEALVEAIVCGMKETSLSSKKVGNNHGSLSVEACQLALITRWAGDHHTNFWKQGIDRVLLNLVIENIEDQLFGPVLSLEKQIYMAKEGLKANYHLGLRSYVWDILGWLTIHCGENLNPNTHGSELCINLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVSRAVLMMIHSPCNSISSHTRFLLSDVLKVKGMSCLKSLLHTLDYTSSLESYGSFDKLQLVVNLIGFTCLSSLPQYQRCIIESKGIKVIVLLMKRCLNNDIHIERKSFASHLHTTCHERSCCCYDKQDWEGSNILLFYSLLGLTEILHQCDLLQDNPQQFSREVTNIKPQLVSKLQEICKSNSFSPGVRWYVSYILTYFGYYGFPNELAKRIGKYLNKEEYSDMKLVVANGESLSVHDVILVVRCPSLLPPQLLPCRKSSKEIADKFVRETMTEVRLSSHVDYEALALLLEYVYLGCVHANEETAKKLKILAKRCNLHPLFQMLHRQRPKWGTPFPSFDLTSSFGLAGNCFSDVILEAKSNELVEWTCNICSDTVPHVHAHKIILQSGCDYLLGLFRSGMQERHLKGLS* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01227 877 Gene3D - 26 342 IPR011989 -
Lapu5g01227 877 Gene3D Potassium Channel Kv1.1; Chain A 672 795 IPR011333 -
Lapu5g01227 877 PANTHER OS06G0674800 PROTEIN 5 873 IPR044953 -
Lapu5g01227 877 SUPERFAMILY ARM repeat 50 690 IPR016024 -
Lapu5g01227 877 CDD BTB_POZ_ZBTB_KLHL-like 819 872 - -
Lapu5g01227 877 Pfam BTB/POZ domain 682 791 IPR000210 GO:0005515
Lapu5g01227 877 SUPERFAMILY POZ domain 669 792 IPR011333 -
Lapu5g01227 877 ProSiteProfiles BTB domain profile. 690 770 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Lapu5g01227 BTB 4.5e-05 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01227 - - gmx:100786565 1488.01