Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01220 ATGGTTATGGCAAATAGTAGCATAAACTTGGTGTTTCATCAGGGGTCAATGTTGCCCTATGAACTTCCTGTAGCTTCTCAACTTGGACCTTCATGCTTTCATTCGTTTTCTTCAACTTGGGCTATCAACAATGGAGCCATTCGTGTCTCACCACAAAGGTGGAATTGCAGTGCTACTGCTTGTTATTGCTTCCGTTTCTGGAAATGTAGATGCAAGTGGAAACGGCTAGTAAGAAGTTGCTCCACCAGTGAATTTGTTATTGCCAGTGATGAAAACTATGGCAATAAACAGGTTGTTAGTCTCACTCCCCGCCTTTACGAATATGTTCTAAAAAATGTTCGAGAGCCAGAGATTCTAAGGCAATTGCGGCAGGAGACAGCCTCTATGCGTGGAAGTCAAATGCAGGTGTCCCCTGATCAGGCACAGCTTCTGGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGTGTTTATACTGGATACTCATCACTAGCCATAGCATTAGTTCTGCCAGAATCAGGTCATTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAGAAGTATTATCAGCTAGCTGGTGTTTCACATAAGGTGGATGTAAAACTTGGACTTGCAATGGATTCCCTAGAATCTTTAATTCTGAATGGTGAAGCAGGAAGCTATGATTTTGCATTTATTGATGCCGAGAAAAGAATGAACGAGAAATATTTTGAACTGCTACTACAGCTGGTGAGAGTTGGAGGTCTTATTGTTATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGACCCACTGGTATATGACCCTAAAACTATCAGCATTAGAAATTTTAACCAAAAGTTAATGGAAGATGAGCGTGTAAACATCAGTATGGTACCCATCGGAGACGGGATGACGATCTGTCGAAAAGGCTGA 939 0.4196 MVMANSSINLVFHQGSMLPYELPVASQLGPSCFHSFSSTWAINNGAIRVSPQRWNCSATACYCFRFWKCRCKWKRLVRSCSTSEFVIASDENYGNKQVVSLTPRLYEYVLKNVREPEILRQLRQETASMRGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGHLVACERDAKSLDVAKKYYQLAGVSHKVDVKLGLAMDSLESLILNGEAGSYDFAFIDAEKRMNEKYFELLLQLVRVGGLIVIDNVLWHGKVADPLVYDPKTISIRNFNQKLMEDERVNISMVPIGDGMTICRKG* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01220 312 Gene3D Vaccinia Virus protein VP39 87 311 IPR029063 -
Lapu5g01220 312 CDD AdoMet_MTases 155 260 - -
Lapu5g01220 312 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 311 IPR029063 -
Lapu5g01220 312 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 95 312 IPR002935 GO:0008171
Lapu5g01220 312 PANTHER O-METHYLTRANSFERASE-RELATED 95 311 - -
Lapu5g01220 312 Pfam O-methyltransferase 113 311 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01220 Lapu-Chr5 24467676 24471043 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01220 74 300 Monolignol Biosynthesis Gene Families AT3G62000 75.652 3.48e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01220 - - gmx:100776619 561.992