Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01217 ATGGCTTCTTTCCAAAGCATGAACATTGAAGCTCAAATACCAGAAGAGATTCTCATAGCTCAGATTATGCAACTTCATGCAAGCATCTCCAAGCTTGAATCCCTTAGGCCATGCAAGCAAGTGAATAGCCTCTTCACTAACCTTGTGAAACTTTGCACTCTCCCTTCATCCATTGACATTGAGGCCTTGCCTCAAGAGGTGCAAGAGATGCGTGAGAGCCTCATTAACCTTAGTGGCCAAGCCGAGGGACTCTTAGAGCTTGAATTCTCAACCTTCATAAGCCTCACACCTGAGCCCTTCAAGAATGTGACCCTTTTCCCTTACTATGGCAACTACATGAAACTAGCACACATAGAGAACAAACTCCTCAAAGAAAGTGGGTTGGTGAATGCAAAGAAAGTGGCTTTTGTAGGGTCAGGTCCAATGCCACTCACTTCCATCATAATGGCCACTCACCACATGGAGTCCACACACTTTGACAACTTTGACATTGATGAGAAGGCAAACGAGGTGGCTCGAAAGATTGTTGCTTCTGATGCAGCACTCGAGAAGAGGATGAAGTTTGTGACTCAAGACATCATGGAAGTGAGAGAGCGGTTGGGGCAGTATGATTGCATCTTTTTGGCAGCACTTGTGGGCATGAATAGGGAAGCAAAACAGAAGATTTTGGGACACATAAGTAGGTATATGAAGGAGGGAGGGATTTTGCTCGTGAGAAGTGCAAAAGGGTCAAGAGCATTCTTGTACCCTATTATTGAGGAAAGTGACATGGTTAATTTTGAGGTTCTTACCATCTTTCACCCCACAAATGATGTGATCAACTCGGTTGTTCTTCTTCGCAAGCCTAAAGCTTAG 855 0.4456 MASFQSMNIEAQIPEEILIAQIMQLHASISKLESLRPCKQVNSLFTNLVKLCTLPSSIDIEALPQEVQEMRESLINLSGQAEGLLELEFSTFISLTPEPFKNVTLFPYYGNYMKLAHIENKLLKESGLVNAKKVAFVGSGPMPLTSIIMATHHMESTHFDNFDIDEKANEVARKIVASDAALEKRMKFVTQDIMEVRERLGQYDCIFLAALVGMNREAKQKILGHISRYMKEGGILLVRSAKGSRAFLYPIIEESDMVNFEVLTIFHPTNDVINSVVLLRKPKA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01217 284 PANTHER NICOTIANAMINE SYNTHASE 3 13 282 IPR004298 GO:0030410|GO:0030418
Lapu5g01217 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 240 IPR029063 -
Lapu5g01217 284 Gene3D Vaccinia Virus protein VP39 16 283 IPR029063 -
Lapu5g01217 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 284 IPR004298 GO:0030410|GO:0030418
Lapu5g01217 284 CDD AdoMet_MTases 162 238 - -
Lapu5g01217 284 Pfam Nicotianamine synthase protein 15 283 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01217 Lapu-Chr5 24420795 24421649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01217 15 281 Nicotianamine Synthase Gene Family AT1G56430 47.601 9.12e-90 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01217 K05953 - gmx:100819726 494.967