Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01213 ATGGCAGATGAGGTGGTTCTGCTAGATTTCTGGCCAAGTCCATTCGGGGCGAGGGTGAGGATTGCACTTGCTGAAAAGGGTATAAAGTATGAACACAAAGAAGAGGACTTGAAGAACAAGAGTTCTCTACTCCTGCAAATGAACCCGGTTCACAAGAAAATTCCGGTTCTTATCCACCGGGGCAAGCCAATTTGTGAATCTCTCATTGCTGTTCAGTACATTGAGGATGTTTGGAATGACACAAATCCCTTGCTGCCTTCTGACCCTTATCAGAGAGCACAGGCTAGATTCTGGGCTGATTATGTTGACACCAAGATATATGATATGGGAAGGGTTTCGACTTCAAAAGGAGAAGAAAGAGAAGCTAGCTTGAAGGAATTCATAGAATTCCTTAAATTGTTGGAGGAACAATTGGGAGAGAAGAGTTATTTTGGAGGAGAGAATCTTGGTTTTGTGGACATAGCACTTGTCCCATTCTACCCTTGGTTCAAAGCCTATGTGACTTTTGTCCCCCTCAACATGGATGGTGAGTGCCCCAAGTTTACTGCCTGGGCAGAGAGGTGTCTCCAAAAAGAAAGTGTTGTCAAGTCTCTTCCTGATCAACAGATGGTCAATGAGATAACAAAAATGAACTTAGGCATTGAG 645 0.4372 MADEVVLLDFWPSPFGARVRIALAEKGIKYEHKEEDLKNKSSLLLQMNPVHKKIPVLIHRGKPICESLIAVQYIEDVWNDTNPLLPSDPYQRAQARFWADYVDTKIYDMGRVSTSKGEEREASLKEFIEFLKLLEEQLGEKSYFGGENLGFVDIALVPFYPWFKAYVTFVPLNMDGECPKFTAWAERCLQKESVVKSLPDQQMVNEITKMNLGIE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01213 215 FunFam Glutathione S-transferase U20 88 213 - -
Lapu5g01213 215 Gene3D - 88 215 - -
Lapu5g01213 215 FunFam Tau class glutathione S-transferase 1 87 - -
Lapu5g01213 215 SUPERFAMILY GST C-terminal domain-like 76 210 IPR036282 -
Lapu5g01213 215 CDD GST_C_Tau 89 201 IPR045074 GO:0004364|GO:0006749
Lapu5g01213 215 CDD GST_N_Tau 5 78 - -
Lapu5g01213 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 207 IPR010987 -
Lapu5g01213 215 Pfam Glutathione S-transferase, C-terminal domain 119 187 - -
Lapu5g01213 215 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 203 IPR045073 -
Lapu5g01213 215 Pfam Glutathione S-transferase, N-terminal domain 6 75 IPR004045 -
Lapu5g01213 215 SFLD Main (cytGST) 2 206 - -
Lapu5g01213 215 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lapu5g01213 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lapu5g01213 215 SFLD Main.3: Omega- and Tau-like 2 206 IPR045073 -
Lapu5g01213 215 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01213 Lapu-Chr5 24384799 24385907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01213 1 208 Glutathione S-transferase Gene Family AT1G78380 62.679 3.49e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01213 K00799 - gmx:547520 357.066