Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01212 ATGGCAGAAGAGCTGGTTCTGCTAGATTTCTGGCCAAGTCCATTTGGGGCGAGGGTGAGGATTGCTCTTGCTGAAAAGGGTATAAATTATGTGCGCAAAGAAGAGGACTTGAAGAACAAGAGTTCTCTACTCCTGCAAATGAACCCAGTTCACAGGAAAGTTCCTGTTCTTATCCATAAGGGCAAGCCCATTTGTGAATCTCTCATAGTTGTTCAGTATATTGAGGAGGTTTGGAATGACACAAATCCCTTGCTGCCTTCTGATCCTTACCAGAGAGCACATGCTAGATTCTGGGCTGATTATGTTGACACCAAGATATTTAATACCCTAGAGAAGATTTCGATATCAAAAGGAGAAGAATCAGAAGGTCTGAAGAAGGAGTTGATAGAAGCCCTTAAATTGTTGGAGGAAGAAGTGGGAGATAAAAGTTATTTTGGGGGAGAGAATCTTGGTTTTGTGGACATAGCATTTATCCCAGTATACCCTTGGCTCAAATCCTTTGAAACTTTTGTCACCCTTAACATAGACGAGGAGTGTCCCATGTTGATTGCTTGGGCCAAGAGGTGCCTCCAAAAAGAGAGTGTTGCCAAGTCTCTTCCTGGGCAGCAGAAGGTCGAGGAGTTCACCAGAAAGATCTTTGGCATTCAGTAG 651 0.4363 MAEELVLLDFWPSPFGARVRIALAEKGINYVRKEEDLKNKSSLLLQMNPVHRKVPVLIHKGKPICESLIVVQYIEEVWNDTNPLLPSDPYQRAHARFWADYVDTKIFNTLEKISISKGEESEGLKKELIEALKLLEEEVGDKSYFGGENLGFVDIAFIPVYPWLKSFETFVTLNIDEECPMLIAWAKRCLQKESVAKSLPGQQKVEEFTRKIFGIQ* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01212 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 208 IPR010987 -
Lapu5g01212 216 Gene3D - 88 216 - -
Lapu5g01212 216 Gene3D Glutaredoxin 1 87 - -
Lapu5g01212 216 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Lapu5g01212 216 FunFam Tau class glutathione S-transferase 1 87 - -
Lapu5g01212 216 SFLD Main (cytGST) 2 211 - -
Lapu5g01212 216 CDD GST_N_Tau 5 78 - -
Lapu5g01212 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lapu5g01212 216 FunFam Glutathione S-transferase U20 88 215 - -
Lapu5g01212 216 SUPERFAMILY GST C-terminal domain-like 76 213 IPR036282 -
Lapu5g01212 216 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 205 IPR045073 -
Lapu5g01212 216 Coils Coil 118 138 - -
Lapu5g01212 216 CDD GST_C_Tau 89 212 IPR045074 GO:0004364|GO:0006749
Lapu5g01212 216 Pfam Glutathione S-transferase, N-terminal domain 5 75 IPR004045 -
Lapu5g01212 216 SFLD Main.3: Omega- and Tau-like 2 211 IPR045073 -
Lapu5g01212 216 Pfam Glutathione S-transferase, C-terminal domain 120 192 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01212 Lapu-Chr5 24372096 24373120 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01212 1 215 Glutathione S-transferase Gene Family AT1G78340 61.860 9.32e-99 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01212 K00799 - gmx:547520 326.635