Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01206 ATGGACGAGGTGGTTCTGTTGGATACATGGGGCAGCATGTTTGGGATGAGGGCTTGGATTGCATTGGCAGAAAAGGGTGTTAAGTACGAACGCAAGGAAGAGGATCTCAGCAACAAGAGCCCTCTGCTTCTGCAGATGAACCCTATTCACAAGAAGATTCCAGTTCTGATCCATAATGGAAAACCCATTTCTGAATCTGCAATAATAGTGCAGTACATCGATGAGGTCTGGAATCACAACCCTCAACTCATGCCCTCTGACCCTTATGAGAGAGCTCAAGCCAGATTCTGGGTTGATTACATTGACGCAAAGGTGTATCCTACTTGGAATAAAATGTGGCTTTCGAAAGGAGAAGAACACGAGGCAGGAAAACAAGAGTTGATTTCTATCTTCAAGCAGCTAGAAGAGACATTGGGTGACAAACCCTTTTACGGAAATGACTCGTTTGGATTTGTTGATGTTGCTCTGATCCCTTTCTACAGTTGGTTTTACACTTTCGAGACATACGGCAACTTTGAAATGGAAGCACAATGTCCTAAACTCGTGGCTTGGGCTAAAAGATGCATGCAGAGAGAGACTGTGTCTACAATTCTTCCTAATGGGAAGGAAGTTTATAATGCCGTTGTGGAAATGAGTAAGAAACTCGAATCGAAATAG 657 0.4353 MDEVVLLDTWGSMFGMRAWIALAEKGVKYERKEEDLSNKSPLLLQMNPIHKKIPVLIHNGKPISESAIIVQYIDEVWNHNPQLMPSDPYERAQARFWVDYIDAKVYPTWNKMWLSKGEEHEAGKQELISIFKQLEETLGDKPFYGNDSFGFVDVALIPFYSWFYTFETYGNFEMEAQCPKLVAWAKRCMQRETVSTILPNGKEVYNAVVEMSKKLESK* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01206 218 SFLD Glutathione Transferase (cytosolic) 1 217 IPR040079 -
Lapu5g01206 218 CDD GST_N_Tau 4 77 - -
Lapu5g01206 218 FunFam Glutathione S-transferase U20 87 218 - -
Lapu5g01206 218 CDD GST_C_Tau 88 199 IPR045074 GO:0004364|GO:0006749
Lapu5g01206 218 Gene3D - 87 218 - -
Lapu5g01206 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 204 IPR045073 -
Lapu5g01206 218 Pfam Glutathione S-transferase, C-terminal domain 121 187 - -
Lapu5g01206 218 Pfam Glutathione S-transferase, N-terminal domain 5 75 IPR004045 -
Lapu5g01206 218 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Lapu5g01206 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lapu5g01206 218 SUPERFAMILY GST C-terminal domain-like 75 208 IPR036282 -
Lapu5g01206 218 Gene3D Glutaredoxin 1 86 - -
Lapu5g01206 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Lapu5g01206 218 FunFam Tau class glutathione S-transferase 1 86 - -
Lapu5g01206 218 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01206 Lapu-Chr5 24336974 24338341 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01206 2 215 Glutathione S-transferase Gene Family AT1G78380 61.682 1.70e-100 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01206 K00799 - gmx:100500477 378.252