Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01201 ATGGCTTCGGAGAACCTAAACCCCGCCACAGTCTCCCAAGCCGTGGAGGCGCTCCTCAAATGGCGTCGTTCCCAATCGGAGACTCAAAAGCCCAAACTCTTCGACGAAGACGAAGAATTTGTGTACCTCATCGTTACGCTGAAGAAGATCCCCGCAAAATCGCGCGTTAACCCTTATAAGATCCCTCTCCCTCACTCCCTCCTCTCGCCGTTCTCGGAACAGTGCCTCATCCTCGACGACCGGCCCAACAAGGCCCGCGTCACTAAGGCCGAGGCCCAGGCCAGGATCCAATCCGAGTCCATTCCCATCGCGAAAATCCTCAAACTCTCAAAGCTGGCCTCTGATTTCCGTGCTTTTGAGGCCAAGCGGAAGCTCTGTGATTCCTACGATTTGTTTTTTGCAGAGAAGAGTATTGTGCCGTTGCTTCCACGGCTACTCGGGAAGCAGTTTTTCAAGAAGAGGAAGTTGCCGGTGCCGGTTGATTTGAAGAAGAGTAACTGGAAGGAGCAGGTGGAGAGGGCGTGCTCGTCTGCGATGCTCTTCATGCGAACCGGCACGTGTAGCGTGGTTAGGGTTGCGAAGGTTGGGATGGAGAGGGACTCGATTGTGGAAAATGTTGTGGCCGCGGTTGAGGGAATTGTGGAGGTTGTGCCGAAGAAGTGGGGGAATGTGCGGTCGCTTCATTTGAAACTGTTGGAGAGTGTCTCGTTGCCCGTGTATCAGGTGGTTCCGGATGTGAAGTTGAGGATTGAGGGTGCTAACGAGCAGGCTGAGATAAAGGAGAAGCATAAGAAGAAGGAAAAGGATGGTGAGGTTCCGGAATCGGCGAAGAAGAAGGGGAGGATTCATGAAGTTAGGTATATGGATGAGAATGATGGTGAGGATGAGATTGAAAATGAATTGGCGAGTGATGATGGTGGTGGTGATGAGAATGAGAAGGTGAATGAGAAGAGGAAGAGAGGGGTTTCGAGTTTGTTGAATGGTGGGAAGAGGTTGAAGAAATCGTCTGGTGTCAAGGAGAAGAAGAAAAAGGTGAAGAGTGGAAGTGAATTGGTTGTTAGGGATGAGGAATCTGGTGTGAAGAAGACAAAGAAAGGGGAATTGAAGAAGATGAAGACAGGGGAAGTGAAGGTGAAGGCTGTGAAAAGTTTGAAGGCTAAGAAAAGTAAGAAGGCCTTGTGA 1182 0.5042 MASENLNPATVSQAVEALLKWRRSQSETQKPKLFDEDEEFVYLIVTLKKIPAKSRVNPYKIPLPHSLLSPFSEQCLILDDRPNKARVTKAEAQARIQSESIPIAKILKLSKLASDFRAFEAKRKLCDSYDLFFAEKSIVPLLPRLLGKQFFKKRKLPVPVDLKKSNWKEQVERACSSAMLFMRTGTCSVVRVAKVGMERDSIVENVVAAVEGIVEVVPKKWGNVRSLHLKLLESVSLPVYQVVPDVKLRIEGANEQAEIKEKHKKKEKDGEVPESAKKKGRIHEVRYMDENDGEDEIENELASDDGGGDENEKVNEKRKRGVSSLLNGGKRLKKSSGVKEKKKKVKSGSELVVRDEESGVKKTKKGELKKMKTGEVKVKAVKSLKAKKSKKAL* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01201 393 MobiDBLite consensus disorder prediction 259 368 - -
Lapu5g01201 393 FunFam Ribosomal protein L1p/L10e family 85 176 - -
Lapu5g01201 393 Gene3D - 84 177 IPR016095 -
Lapu5g01201 393 CDD Ribosomal_L1 11 239 IPR028364 -
Lapu5g01201 393 MobiDBLite consensus disorder prediction 306 320 - -
Lapu5g01201 393 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 14 233 - -
Lapu5g01201 393 MobiDBLite consensus disorder prediction 259 290 - -
Lapu5g01201 393 MobiDBLite consensus disorder prediction 342 368 - -
Lapu5g01201 393 Pfam Ribosomal protein L1p/L10e family 31 235 IPR028364 -
Lapu5g01201 393 MobiDBLite consensus disorder prediction 291 305 - -
Lapu5g01201 393 SUPERFAMILY Ribosomal protein L1 19 240 IPR023674 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01201 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 32.039 9.25e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01201 K14775 - gmx:100782862 498.819