Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01164 ATGGAAGTAGCGTGTACCACGATTCTGATTCTGATACTGCTTCTGATATGGGCATGGAGGATGCTGAATTGGTTATGGTTCACTCCGAAGAGGCTTGAAAGGCTTCTCAGAGAGCAGGGCCTTCAAGGCAATCCATATACGTTTTTTGTTGGAGACACGAACGAGTTTGCGAAGATGAGAAAGGAAGCCTTCTCCAAACCCATGGATCTCTTCTCTCACGACATCGTTCCGCGTGTGTTTCCCTTTTTCCATCACAGTATCAACACACATGGCAAAAATTGTTTTAATTGGTTTGGATCAATACCAAGGATAATCCTCACTGATCCTGAGTTAATCAAGGATGTATTAAACAAGCCGAATGAGTTCGGAAAGATTCATATGCATCCTCAAGTCAGGTTCCTAGCTCCTGGTCTTGTAAGCCTTGAGGGAGAAAGGTGGATCAAGCATAGAAAGATAATCAATCCTGCTTTCAATTTAGAGAAGTTGAAGAATATGTTACCACTATTCATCAAATGTTGTGATGATCTGATCAGCAAATGGGAGGAAAAGTTGTCTTTAGATGGATCAAGTGAAATAGATATTTGGCCTTTCCTTCATAATTTGGCTAGTGATGCTATTTCTCGAACAGCCTTTGGAAGTAGTTACGAAGAAGGACGAAGAATATTTCAACTTCTAAAAGAGCAAATTGAACTTACAGTGGAAATTATGTTGAAAGTTTACATCCCTGGATGGAGGTTTGTACCTACAACCACCCACAGAAGGATGAAGGCAATTGACAGGGAAATAAAAGCTTCACTTATGGACATTATTACCAACAGAGTGAAAGCACTAAAGCTAGGTGAAGCCACTAACAATGACTTGTTAGATATACTTCTCGAGTCAAATCACAAGGAAATTCAAGAACAGGGAAACAACAAGAATATTGGAATGAATAATGAAGATGTTATTGCAGAATGCAAGCTATTCTACTTTGCAGGGCATGAGACTACTTCATCTTTGCTTGTTTGGACAATGATATTATTGAGTATGTATCCTGATTGGCAAACACGCGCAAGGGAGGAAGTCTTACAAGTTTTTAGTAATCGAAAACCAGATTTTGATGGACTAAACCACCTTAAGATTGTCACCATGATTTTGAATGAGGTTTTAAGGCTATACTCACCAGTAGTTAGTTTTGCTCGAAAAGTTCGTAAAGATATAAAGCTTGGAAACCTATCATTAGCTGCTGGAGTTCAAGTTTTCGTGCCAGTAGTTTTGGTTCACCATGATTGTGAGCTCTGGGGTGATGATGCTAAGGAGTTCAAACCCGAGAGATTTGCTGAAGGAGTTCTAAAGGCCACAAATGGTAGAGCTTCACTATTTCCCTTTGGAGGGGGTCCTAGGATATGCATTGGACAAAACTTCTCCTTGTTGGAAGTAAAGATTGCTTTGTCAATGATTTTACAACGTTTCTCGTTTGAACTCTCTCCCACTTATACTCATGCTCCAACCGCGGGACTTACTCTTCAACCCCAACATGGTGCTCATCTCATCCTACATAAGGTGGAAATATGA 1554 0.4015 MEVACTTILILILLLIWAWRMLNWLWFTPKRLERLLREQGLQGNPYTFFVGDTNEFAKMRKEAFSKPMDLFSHDIVPRVFPFFHHSINTHGKNCFNWFGSIPRIILTDPELIKDVLNKPNEFGKIHMHPQVRFLAPGLVSLEGERWIKHRKIINPAFNLEKLKNMLPLFIKCCDDLISKWEEKLSLDGSSEIDIWPFLHNLASDAISRTAFGSSYEEGRRIFQLLKEQIELTVEIMLKVYIPGWRFVPTTTHRRMKAIDREIKASLMDIITNRVKALKLGEATNNDLLDILLESNHKEIQEQGNNKNIGMNNEDVIAECKLFYFAGHETTSSLLVWTMILLSMYPDWQTRAREEVLQVFSNRKPDFDGLNHLKIVTMILNEVLRLYSPVVSFARKVRKDIKLGNLSLAAGVQVFVPVVLVHHDCELWGDDAKEFKPERFAEGVLKATNGRASLFPFGGGPRICIGQNFSLLEVKIALSMILQRFSFELSPTYTHAPTAGLTLQPQHGAHLILHKVEI* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01164 517 CDD CYP72 80 511 - -
Lapu5g01164 517 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 Pfam Cytochrome P450 86 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 FunFam Cytochrome P450 734A1 26 516 - -
Lapu5g01164 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 508 - -
Lapu5g01164 517 Gene3D Cytochrome P450 25 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Lapu5g01164 517 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01164 517 SUPERFAMILY Cytochrome P450 76 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01164 Lapu-Chr5 23625182 23634795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01164 17 515 Cytochrome P450 AT3G14610 56.375 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01164 - K23809 gmx:100782454 825.469