Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01163 ATGGAAGCAGCTTGGACCAGGATTCTGATGCTGATTCTGATGCTGATTCTGATACTGGTCCTGATATGGGCATGGAGGATGCTGAATTGGATATGGTTCACTCCAAAGAGGCTTGAAAAACTTCTTAGAGAGCAAGGCCTTCAAGGCAATCCATACAGGATTCTCGTTGGAGACACGAACGAGTATGCGAAGATGAGAAAGGAAGCCTTCTCCAAACCCATGGATCTCTTCTCTCACGACATAGTGCCGCGTGTATTTTCCTTTTTCCATCACAGTATCAACACACATGGCAAAAATTCGTTTAGTTGGTTTGGACCAGTTCCAAGGGTGACGCTCACTGATCCAGAGCTAATAAAAGATGTATTAAACAAGACATACGACTTCGAAAAGATTACTATGAATCCACAAGTCAGGTTACTAGCTCCTGGCCTTGTAAGCCACGAGGGAGAAAAGTGGAGCAAGCACAGAAAGATAATCAATCCTGCTTTCAATCTAGAAAAGTTGAAGGATATGTTACCATTATTCATCAAATGTTGTGATGATCTGATTAACAAATGGGAGAACATGTTGTCTTCAGATGGATTAATTGAAATGGACGTATGGCCTTTCCTTCAGAATTTGGCTAGTGACGCTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGACAAAGAATATTTCAACTTCTAAAAGAGCAAACTGAACTTATAGTGCAAGTTATGTTTAAAGTTTACATCCCTGGATGGAGGTTTGTACCTACTACTACCCACAGAAGGATGAAGGCAATTGACAGGGAAATAAAAGCTTCACTTATGGATATTATCAACAACAGAGAGAAGGTACAAAAGGCGGGTGAAGCTACTGAAAATGACTTGTTAGATATACTTCTCAAGTCAAATCACAAGGAAATTCAAGAACATGGAAACAATAAGAATGTTGGAATGAATATTGAAGATGTTATTGAGGAATGCAAGTTATTTTACTTTGCAGGACAGGAGACCACTTCATCTTTGCTTGTTTGGACAATGATATTATTGAGTATGTACCCTGATTGGCAAGCACGTGCAAGGCAGGAAGTCTTACAAGTTTTTGGTAATCAAAAACCAGATTTTGATAGACTGAATCACCTGAAGATCGTTACCATGATTTTGAATGAGGTTCTTAGGCTATACCCACCAATAATTGGTCTTGCTCGAAAAGTTCCTAAAGATGTGAAACTTGGAAATTTATCAATAGTTGCTGGAGTGCACATTTCCGTACCAATACTTTTGGTTCATCATGATTGTGAGCTCTGGGGTGATGATGCTAAGGAGTTCAAACCTGAGAGATTTGCTGAAGGAGTTCTAAAGGCGACAAATGGTAGAGCTTCACTATTTCCCTTTGGAGGGGGTCCTAGGATATGCATTGGACAAAACTTCTCCTTATTGGAAGCAAAGATTGCTTTGTCAATGATTTTACAACGATTCTCGTTTGAACTCTCTCCGACCTATACTCATGCTCCAACTACCTTGATTACTCTTCAACCCCAATATGGTGCTCATCTCATTCTATGTAAAGTTGAAATATAA 1572 0.395 MEAAWTRILMLILMLILILVLIWAWRMLNWIWFTPKRLEKLLREQGLQGNPYRILVGDTNEYAKMRKEAFSKPMDLFSHDIVPRVFSFFHHSINTHGKNSFSWFGPVPRVTLTDPELIKDVLNKTYDFEKITMNPQVRLLAPGLVSHEGEKWSKHRKIINPAFNLEKLKDMLPLFIKCCDDLINKWENMLSSDGLIEMDVWPFLQNLASDAISRTAFGSSYEEGQRIFQLLKEQTELIVQVMFKVYIPGWRFVPTTTHRRMKAIDREIKASLMDIINNREKVQKAGEATENDLLDILLKSNHKEIQEHGNNKNVGMNIEDVIEECKLFYFAGQETTSSLLVWTMILLSMYPDWQARARQEVLQVFGNQKPDFDRLNHLKIVTMILNEVLRLYPPIIGLARKVPKDVKLGNLSIVAGVHISVPILLVHHDCELWGDDAKEFKPERFAEGVLKATNGRASLFPFGGGPRICIGQNFSLLEAKIALSMILQRFSFELSPTYTHAPTTLITLQPQYGAHLILCKVEI* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01163 523 CDD CYP72 86 517 - -
Lapu5g01163 523 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 Gene3D Cytochrome P450 74 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS E-class P450 group I signature 207 225 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Lapu5g01163 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 514 - -
Lapu5g01163 523 SUPERFAMILY Cytochrome P450 82 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01163 523 FunFam Cytochrome P450 734A1 32 522 - -
Lapu5g01163 523 Pfam Cytochrome P450 86 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01163 Lapu-Chr5 23607836 23613408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01163 23 521 Cytochrome P450 AT3G14610 57.086 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01163 - K23809 gmx:100782454 861.292