Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01162 ATGGAAGCAGTATGGACCAGGATTCTGATGCTGATTCTGATACTGGTTCTGATATGGGCATGGAGGATGCTGAATTGGTTATGGTTCACTCCAAAGAGGCTTGAAAGGCTTCTCCGAGAGCAAGGCTTTCAAGGCAATACATACACGCTTCTCGTTGGAGACATGAACGAGCTGATGAAGATGAGAAAGGAGGCCTTCTCCAAACCCATGAATCACTTCTCTCACGACATAGTACCGCGTGTGTTTTCCTTTTTGCATCACAGTATCAACACACATGGCAAAAATTCTTTTATTTGGTTTGGACCAGTACCAAGGGTGACCCTCACTGATCCTGAGCTGATCAAAGAGGTATTAAACAAGATGTATGACTTCGGAAAGATTAAAGGGAATCCACAAATCAGGTTACTAGCTCCTGGTCTTGTAAGCCACGAGGGAGAAAAGTGGAGCAAGCATAGAAAGATAATCAATCCTGCTTTCAATTTAGAGAAGTTGAAGAATATGTTACCACTATTCATCAAATGTTGTGATGATCTTATTAGCAAATGGGAGGAAATGTTATCTTTAGATGGATCAAGTGAAATGGACGTATGGCCTTTCCTTCAGAATTTGGCTTGTGACGCTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGACGAAGAATATTTCAACTTCTAAAAGAGCAAGGTGAACTTACAATGCAACTTATGTTCAAAGTTTACATCCCTGGATGGAGGTTTGTACCTACAACTACCCATAGAAAGATTAACGCAATTGACAGGAAAATAAAAGCTTCACTTATGGATATTATTAACAACAGAGAGAAAGCACTAAAGGCGGGTGAAGCCACTAAAAATGACTTGTTAGATATACTTCTCGAGTCAAATCACAAGGAAGTTCAAGAACAGGGAAACAATAAGAATGTTGGAATGACTATTGAAGATGTTATTGGCGAATGCAAACTATTTTACTTTGCAGGGCAAGAGACCACTTCATCTTTGCTTGTTTGGACAATGATATTATTGAGTATGTACCCTGATTGGCAAACACGTGCAAGGGAGGAAGTCTTGCAAGTTTTTGGCAATCGAAAACCAGATTTTGATGGATTAAATCACCTTAAGATTGTTACCATGATTTTGAACGAGGTTTTTAGACTATACCCACCAGTAATTGGTCTTGCTCGAAAAGTTTCTAAAGATGTGAAGCTTGGAAACCTATCATTAGCTGCTGGAATGCAAGTTTTCATGCCAATAATTTTGGTTCACCACGATTGTGAGCTCTGGGGTGATGATGCTAAGGAGTTCAAACCTGAGAGATTTGCTGAAGGTGTTCTAAAGGCTACAACAAATGGCAAAGTTTCACTAGTTCCGTTTGGAGGGGGTCCTAGGATATGCATTGGACAAAACTTCTCTTTGTTGGAAGCAAAGCTTGCTTTGTCAATGATTTTACAATATTTTTCGTTTGAACTCTCTCCAACTTATACTCATGCTCCAACTACCGTGATTACTCTTAAACCCGAGTATGGTGCTCATCTCATTCTACGTAAAGTGCAAATATAA 1563 0.3954 MEAVWTRILMLILILVLIWAWRMLNWLWFTPKRLERLLREQGFQGNTYTLLVGDMNELMKMRKEAFSKPMNHFSHDIVPRVFSFLHHSINTHGKNSFIWFGPVPRVTLTDPELIKEVLNKMYDFGKIKGNPQIRLLAPGLVSHEGEKWSKHRKIINPAFNLEKLKNMLPLFIKCCDDLISKWEEMLSLDGSSEMDVWPFLQNLACDAISRTAFGSSYEEGRRIFQLLKEQGELTMQLMFKVYIPGWRFVPTTTHRKINAIDRKIKASLMDIINNREKALKAGEATKNDLLDILLESNHKEVQEQGNNKNVGMTIEDVIGECKLFYFAGQETTSSLLVWTMILLSMYPDWQTRAREEVLQVFGNRKPDFDGLNHLKIVTMILNEVFRLYPPVIGLARKVSKDVKLGNLSLAAGMQVFMPIILVHHDCELWGDDAKEFKPERFAEGVLKATTNGKVSLVPFGGGPRICIGQNFSLLEAKLALSMILQYFSFELSPTYTHAPTTVITLKPEYGAHLILRKVQI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01162 520 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 FunFam Cytochrome P450 734A1 28 519 - -
Lapu5g01162 520 SUPERFAMILY Cytochrome P450 77 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Lapu5g01162 520 Pfam Cytochrome P450 82 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 Gene3D Cytochrome P450 66 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu5g01162 520 PANTHER CYTOCHROME P450 FAMILY MEMBER 17 511 - -
Lapu5g01162 520 CDD CYP72 82 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01162 Lapu-Chr5 23594271 23599662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01162 19 518 Cytochrome P450 AT3G14610 57.570 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01162 - K23809 gmx:100782454 860.907