Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01153 ATGGAAGAAGAAGGCACGGATTCGAGAAAGCAAGCGAGGCTCGCCATCATGGAACTCGCCAACATGATAAGCGTTCCGATGGCTCTAAACGCCGTCGTTCGCCTCAACGTCGCCGACACCATCTGGAACGCCGGCGCCAACGTCCCCCTCTCCGCCGCCCAGATCCTCCCACGCATCCTCCCCGCCGGCGACGCCGAGAACCTACAGCGCCTCCTCCGCATCCTCACCAGCTACGGCGTCTTCCGCGAGCACCTCGCCGCCGGCGAACGCAAGTACTCTCTCACCGACATCGGCAAAACGCTTGTCACCGACGAGGAAGGCCTCTCCTACGGGGCTTACGTGCTCCAACACCACCAGGATGCGTTGATGCGAGCGTGGCCATTGGTGCACGAGGCAGTGGTGGACCCTACGAGGGAGCCCTTCGAGAGGGCGAACGGGGAGGGAGCGTATGGGTATTACCTGAAGCAACCGGAGATGAACGAGCTAATGGTGAAGGCGATGTCAGGGGTATCAGTGCCCTTCATGAGGGCCATGTTAGAGGGCTACGACGGCTTCCAAGGTGTGGAGAAGCTGGTGGACGTGGGTGGTAGTGGCGGTGACTGCCTCCGCATGATCCTGCAGAAACACCCCACCATCAGAGAAGGGATCAACTTCGACCTCCCTGAAGTTGTGGCCAAAGCACCACCAACTCCACGTGTAACCCATGTGGGTGGTGACATGTTCAACTCTATTCCCCAAGGAGACGCTATCTTCATGAAGTGGGTGCTAACAACATGGACGGATGAGGAAATAAAGCAGATAATGCAGAACTGTCACAAAGCAGTTCCTGAGGGAGGGAAACTGATAGCTTGTGAGCCAGTGCTGCCAGAGCACTCAGATGAGAGTCACAGAACAAGGGCGTTGCTTGAGGGTGACATTTTTGTGATGACAATCTACAGAGCCAAGGGGAAGCACAGGACTGAAGAACAGTTCAGGCAGTTAGGCATTGATGCAGGTTTCCCTCGTTTCAGAGCCATCAATGTTGACCATTTCTACACTGTCCTTGAGTTTCAGAAATGA 1059 0.5609 MEEEGTDSRKQARLAIMELANMISVPMALNAVVRLNVADTIWNAGANVPLSAAQILPRILPAGDAENLQRLLRILTSYGVFREHLAAGERKYSLTDIGKTLVTDEEGLSYGAYVLQHHQDALMRAWPLVHEAVVDPTREPFERANGEGAYGYYLKQPEMNELMVKAMSGVSVPFMRAMLEGYDGFQGVEKLVDVGGSGGDCLRMILQKHPTIREGINFDLPEVVAKAPPTPRVTHVGGDMFNSIPQGDAIFMKWVLTTWTDEEIKQIMQNCHKAVPEGGKLIACEPVLPEHSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLGIDAGFPRFRAINVDHFYTVLEFQK* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01153 352 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Lapu5g01153 352 FunFam Caffeic acid 3-O-methyltransferase 107 352 - -
Lapu5g01153 352 Gene3D Vaccinia Virus protein VP39 106 352 IPR029063 -
Lapu5g01153 352 PANTHER O-METHYLTRANSFERASE 17 340 IPR016461 GO:0008168
Lapu5g01153 352 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 107 350 IPR029063 -
Lapu5g01153 352 SUPERFAMILY "Winged helix" DNA-binding domain 8 104 IPR036390 -
Lapu5g01153 352 Pfam O-methyltransferase domain 130 333 IPR001077 GO:0008171
Lapu5g01153 352 Gene3D - 1 105 IPR036388 -
Lapu5g01153 352 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 352 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01153 Lapu-Chr5 23448642 23453580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01153 1 352 Monolignol Biosynthesis Gene Families AT3G53140 74.652 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01153 - - gmx:102663764 635.565