Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01137 ATGGTTGGATTCCAGAGTGAGCATAAGCCCGGGAACAAGTACAATGGTAATTCTAATATTATTCCGGATCGTGTTGAACGTCTTATGAGACGAAGAGAGCTTTTCAAAAGCGGCAAGGCATCTCATTTGAATGAGGCTCCTGATAGTAATAATAATAATAATAATAATAATAATGTGATTACTGAATATTTTGAGCATGACCCGCGCTTGAGGGAAGATAATAACTCTGCTGCTTCCTATGAACGATTACTGGAAGGAGTGGCGGCGGCAGTACGGGGCGAGAGAGAAGATGGGAGACCTTTCAAACAACGGCTTTTGGTGGTGGCCAATAGGCTGCCAGTCTCGGCAATTAGGAAAGGCGAGGATTCGTGGTCTTTGGAGATAAGTGCTGGTGGCCTGGTGAGCGCTCTATTAGGTGTGAAAGCTTTGGAGGCAAGGTGGATAGGTTGGGCTGGAGTCAATGTGCCAGATGAGATTGGACAAAAGGCACTTACAAAAGCTTTGGCTGAAAAAAGGTGTATCCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGTTATTGCAACAACATTCTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCGCCTTGCTACCACACGTAGTTTCCAATCTCAGTTTGAAGCATACCAGAAGGCAAATCAAATGTTTGCTGATGTTGTAAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGTTTCTTCCACAATGCTTAAAGAATTATAACCCCAAAATGAAAGTTGGCTGGTTTCTTCATACCCCATTTCCATCTTCCGAGATTCACAGGACATTGCCTTCTCGTTCAGAGCTTCTGCATGCTGTTCTTGCAGCTGATTTGGTTGGTTTTCACACCTACGACTATGCACGACATTTTGTTAGTGCATGTACCCGCATTCTTGGACTCGAGGGAACGCCTGAAGGGGTTGAGAATCAAGGGAAGCTGACTCGAGTTGCAGCATTTCCAATAGGTATAGACTCAGAACGATTCATACGTGCACTTGACCTTCCTCAAGTGAAGGGTCACATCAAAGAATTACAAGAGAGATTTAAAGGGAGAATGGTGATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAAAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAGTCCTGATTGGCGTGATAAAGTTGTTCTGCTTCAAATTGCCGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAAGTCCATGAAATTGTTGGTCGCATCAATGGCAGATTTGGAACACTTGCTACCGTTCCCATACATCACTTGGATTGCTCTCTTGATTTTCATAAACTATGTGCTTTGTACGCTGTTACGGATGTAGCACTTGTCACCTCTTTAAGGGATGGAATGAATCTTGTAAGTTACGAATTTGTGGCCTGCCAAGATAAAAAGAAAGGGGTTCTCATTCTCAGCGAATTTGCCGGTGCTGCACAGTCACTTGGTGCTGGGGCAATTCTGGTCAATCCTTGGAACATCACAGAAGTTGCTGCTGCAATTGCCAAGGCTCTGAATATGAAATCTGAAGAACGAGAGAAAAGACATAAGCATAACTTTAAACATGTAACAACCCACACTGCTCAGGAATGGGCAGAAACTTTTGTGAGTGAACTAAATGATACTATTGATGAGGCACAGCTAAGGACAAAACAAGTTCCACCACGGCTCCCAACAGAGACTGCAGTTGAACGTTATTTGCAGTCAAATAATCGGTTGCTTATTTTGGGTTTCAATGGAACTCTAACCGTACCAGTTGAGAGAAAAGGTGATCAGTATCAAGAAACGGAACTCACAGTGCATCCAGAACTGAAACAACCCTTGGCAGAACTTTGCAGTGACCCGAAGACCACAGTTGTTGTGCTTAGTGGAAGTGGTAGACCGGTTCTAGATCAAAATTTCAAAGAGTATGACATCTGGCTAGCAGCAGAGAATGGAATGTTTTTAAACCCTTCTAAGGGAGAATGGATGACAACAATGCCAGAGCAACTAAATATGGAATGGGTTGACAGCGTGAAGCATGTTTTTGACTACTTCACAGATAGAACACCTCGATCACATTTTGAAGAAAGGGAAGCTTCACTTGTATGGAGTTACAGACATTCAGATGTTGAGTTTGGAAGACTGCAAGCAAGGGACATGTTGCAGCATCTTTGGACAGGGCCAATTTCTAATGCTTCAGTTGAAGTTGTTCAAGGGAGCCGATCTGTTGAGGTTCGAGCCGCTAATGTTACAAAGGGAGCAGCCATTGACCGTATTCTAGGGGAGATAGTACACAGTAAATCCATGACAACACCAATTGATTACGTTTTGTGTATAGGACATTTTCTAACCAAGGATGAAGATATATATGCGTTTTTTGAGCCAGAGCTACCTTCTATTGGTGTGGGTCTTCCACGAAGTAAGGTAACAGAAGGAGTTAAGTTTCCTGCAGAGAGAATATCGTCATTGAAGATTCCAGCGAGTAAAAGTGGAGCAGCAAAATCATCCCAAAACAAGGGACAACGTGTGCTGCCAAATTCTGAGAGAAAAACAAATAATCATGTGTGCCGTGCACCACGTCGTCCAGCTCCTGAAAAGATCTCTTGGAATGTCCTTGACCTGAAGAAGGAGAATTACTTTTCATGTGCTGTTGGGCGAACACAAACGAATGCTCGGTATACTCTTGGATCACCAGATGAAGTTGTTGCATTTCTGAAGGAACTTGTCAACGCATCTCCATACTCTTTTGTCTGA 2823 0.4279 MVGFQSEHKPGNKYNGNSNIIPDRVERLMRRRELFKSGKASHLNEAPDSNNNNNNNNNVITEYFEHDPRLREDNNSAASYERLLEGVAAAVRGEREDGRPFKQRLLVVANRLPVSAIRKGEDSWSLEISAGGLVSALLGVKALEARWIGWAGVNVPDEIGQKALTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFEAYQKANQMFADVVNKHYEEGDVVWCHDYHLMFLPQCLKNYNPKMKVGWFLHTPFPSSEIHRTLPSRSELLHAVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVENQGKLTRVAAFPIGIDSERFIRALDLPQVKGHIKELQERFKGRMVMLGVDRLDMIKGIPQKILAFEKFLEESPDWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLATVPIHHLDCSLDFHKLCALYAVTDVALVTSLRDGMNLVSYEFVACQDKKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAKALNMKSEEREKRHKHNFKHVTTHTAQEWAETFVSELNDTIDEAQLRTKQVPPRLPTETAVERYLQSNNRLLILGFNGTLTVPVERKGDQYQETELTVHPELKQPLAELCSDPKTTVVVLSGSGRPVLDQNFKEYDIWLAAENGMFLNPSKGEWMTTMPEQLNMEWVDSVKHVFDYFTDRTPRSHFEEREASLVWSYRHSDVEFGRLQARDMLQHLWTGPISNASVEVVQGSRSVEVRAANVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLTKDEDIYAFFEPELPSIGVGLPRSKVTEGVKFPAERISSLKIPASKSGAAKSSQNKGQRVLPNSERKTNNHVCRAPRRPAPEKISWNVLDLKKENYFSCAVGRTQTNARYTLGSPDEVVAFLKELVNASPYSFV* 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01137 940 NCBIfam trehalose-phosphatase 600 816 IPR003337 GO:0003824|GO:0005992
Lapu5g01137 940 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 103 572 - -
Lapu5g01137 940 MobiDBLite consensus disorder prediction 1 20 - -
Lapu5g01137 940 Pfam Glycosyltransferase family 20 104 569 IPR001830 GO:0003824|GO:0005992
Lapu5g01137 940 MobiDBLite consensus disorder prediction 851 875 - -
Lapu5g01137 940 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 104 569 IPR012766 GO:0003825|GO:0005992
Lapu5g01137 940 MobiDBLite consensus disorder prediction 38 59 - -
Lapu5g01137 940 CDD GT20_TPS 104 569 IPR001830 GO:0003824|GO:0005992
Lapu5g01137 940 Gene3D - 605 828 IPR023214 -
Lapu5g01137 940 Gene3D - 691 771 - -
Lapu5g01137 940 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 96 350 - -
Lapu5g01137 940 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 96 932 IPR001830 GO:0003824|GO:0005992
Lapu5g01137 940 Pfam Trehalose-phosphatase 624 828 IPR003337 GO:0003824|GO:0005992
Lapu5g01137 940 MobiDBLite consensus disorder prediction 43 59 - -
Lapu5g01137 940 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 691 771 - -
Lapu5g01137 940 CDD HAD_TPP 602 833 - -
Lapu5g01137 940 MobiDBLite consensus disorder prediction 850 882 - -
Lapu5g01137 940 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 351 553 - -
Lapu5g01137 940 Gene3D Glycogen Phosphorylase B; 351 553 - -
Lapu5g01137 940 Gene3D Glycogen Phosphorylase B; 96 350 - -
Lapu5g01137 940 SUPERFAMILY HAD-like 601 932 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01137 Lapu-Chr5 23198715 23223528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01137 10 935 Trehalose Biosynthesis Gene Families AT1G78580 74.869 0.0 1436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01137 K16055 - gmx:100789554 1676.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01137 5 23198715 23223528 Lapu5g01137 5 23198715 23223528 ECH