Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01121 ATGGCAAGCACCATGAACACCACCATGTCCTCACATTTCTTCCTCCTTTCACTCCTTCCATTTTGTTTCACATGGCTTGCTTTTGGAGTCTCACTGCCAGAGAATGAAGTGTCAGTGCTGAAAGAGATAGCAGAAACACTTGGAAAGAAGGATTGGGACTTCAATGTAGATCCATGTAACTGGAGCTCGTCTGACAACAACAAGCTTCTTTGTAATTGCAAAATAACCAATGACAGCTTCTGCCATGTTGAGAAAATAGCTCTGAAATCACAGAGTCTTCAAGGCAGTCTCCCCCCACAACTGAACAAATTGCCTTATCTCAAAGAAATTGAACTCAGTCGTAACTATCTTAATGGTTCAATTCCTAGAGAATGGGGCTCCTCCAACCTTCAACAAATTTCACTTCTCGGAAACAGACTAACTGGTCCAATCCCAAATGAACTGGGAAACCTCATCAATCTTAGACGCTTGATCCTTGAGTTCAATCAATTATCTGGAAATCTTCCTTCAGAACTTGGAAATCTTGTCCTACTTCAACAACTGCATCTAAGCTCCAATAACTTCACTGGTCAATTGCCAGCAAGTCTTTCTAGTCTTACTGCAATGCAGGAATTCCGAATTAGTGACAACCAGTTATCTGGCAACATACCTGATTTTCTTCAAACTTGGACAAGTCTTGATCAACTATGTATGCAAGGTAGTGGTTTGAGTGGACCAATTCCTGTTGGAATTTTGCCTCTAAACTTAAGCGACTTAAGGATTACTGACTTGAATGGACCTGATTCAACTTTTCCACCACTTGAAAATATGACACGTCTGAAAACTTTGATATTAAGGAGTTGTAATATCAATGACACATTTCCTCAGTATCTTGCAGATCGGTCGATGTTGAGAGTTCTAGACCTAAGCTATAACAAATTAAAAGGACCAGTGCCAAGCCTTCAACAGTTAATAGCAGCGGTCAACATATATTTAACAGGAAACTTCTTCACTGGACCTGTGCCTGAGTGGACAATCGACAATAACAGAAATTTAGATCTTTCATATAACAACTTCAGCGTTGGAAACCAAGAGCCAAAGACATGCAACCAGAAAAATGTGAACTTGTTTGCAAGCTTTTCAAGGAATAAATTAGGACCAGTGTCTTGTGACAGCAGCAATAGAACCTGTACTAAAAATGTTACATCTCTACATATAAATTGTGGTGGAAACCAGACTACTATTGGAGGTATAACATATGACGAAGATATATATCCTGCTGGACCAGCAGTATATAGAGCAAGTAGAAACAATTGGGCAATAAGCAACACGGGTCACTTCATGGAAAATAATACAATTCATACAGGACAGTTTCTACCCTATACCACCGAAAATAAAACTAGGCTTTACATGCCTAATGTTGAATTATATAAGAATGCACGTGTTTCTCCTATGTCATTGACTTATTATGGATTTTGCTTAAAAAATGGAGTCTACAACGTAAAGCTTCACTTTGCTGAGATAATATTCACTGATGATAACACATACAGTGACTTAGGGAGACGTGTATTTGATGTATACATTCAGGGAGAGCGAGTGTTGAAAGATTTTAACATTGTAAATGAAGCACAAGGAGTTGGAAAGGAACTCATAAAAGAATTTCTTGCTCATGTGAGTTGTAATGACCTGGAGATCCGTTTCTACTGGGCAGGCAAAGGGACAACAAATATCCCATATAAATCAGTAAATGGTCCTCTTATATCTGCCCTTTCTGTCACATATGATGGATTTTCATGTGGAACCAAAACAAAAGAAAACTCTACAGGTGGCATGTCTGTAGGAGTTATTGTTGTAATTGTAGTTGCATTGGTGATTGTTGTTATCTTGATTACTGTTAGCGTACTTTGTTGGAGGGGTTTCATTAGTGATTGTTGTCATCTTGGTTCTTGTTGGCATACTTGGGTCGAGGGGTCATGGTCAAACTCAAACTTTGGACGTCATTTTGTTGGAAATGAACATTTATTAATGAAAGATCTCAGGAATATAGAACTGCAAACTGGTGTATTTACCTTGCATCAAATCAAAGTTGCAACAAATAACTTTGATATTTCCAATAAGATTGGAGAAGGAGGCTTCGGCCCTGTTTATAAGGGCATTCTGCCAAACAGCAAACCAATAGCTGTTAAACAACTTTCATCTAAATCAGACCAAGGAACCCGTGAGTTTATAAATGAGATAGGCATGATCTCTGCTCTGCAACACCCTAATCTTGTTAAACTTTATGGTTGTTGTGCTGAGGGTGATCAATTGTTGTTAGTATATGAATATATGGAAAACAATAGCCTTGCACGTGCTTTATTTGTCTCAGAAGATAGCCATTTAAAATTGAATTGGCCAACAAGAAAAAATATTTGTCTTGGCATTGCTAGAGGTTTAGCTTTCCTGCATGAAGAATCGAGACTGAAAGTTGTTCATAGAGACTTAAAGACCTCTAATGTGTTGCTTGATGAGGATCTAAACCCGAAGATATCTGATTTTGGTTTGGCGAGACTTCGTGTGGGGGACAATACACACATAAGCACCAGAATTGCAGGGACTTGGGGATATATGGCTCCTGAGTATGCAATGCATGGTTATCTAACTGAAAAAGCAGATGTTTTTAGTTTCGGAGTTGTTATCTCAGAAATTGTAAGTGGAAAGAGAAACACTATTCGGCAGTCAAAGGGGGAAGCTTTCTATCTTCTGGATTGGGCACATTTGTTGAATGAGAGAGGTAACATAATGGAGCTAGTTGATCCAAAGTTGGGTTTAGACTTCAATGAAGATGAGGTAAGGTTGATTATCAAAGTGGCTCTCCTTTGCACCCATGTCACTTCAAGCTACAGGCCCTGTATGTCTTCAGTGCTAAGCATGCTTGAAGGCAGAACAATGGTCCCAGAGTTTGATTCACAATGTAGTGAAGTAATGGATGAAATGAAGCTGGAGGTAATGAGAGAGTTTTACAGTCAAATGGATGAAAATAAAACAAGTGACAGACGAAGTTTGAGCTTGACAAAAGGTGTTCCATGGAATGATTCTTCTTCAACAGCTACAGACCTTGGCTCACCTTGA 3090 0.3896 MASTMNTTMSSHFFLLSLLPFCFTWLAFGVSLPENEVSVLKEIAETLGKKDWDFNVDPCNWSSSDNNKLLCNCKITNDSFCHVEKIALKSQSLQGSLPPQLNKLPYLKEIELSRNYLNGSIPREWGSSNLQQISLLGNRLTGPIPNELGNLINLRRLILEFNQLSGNLPSELGNLVLLQQLHLSSNNFTGQLPASLSSLTAMQEFRISDNQLSGNIPDFLQTWTSLDQLCMQGSGLSGPIPVGILPLNLSDLRITDLNGPDSTFPPLENMTRLKTLILRSCNINDTFPQYLADRSMLRVLDLSYNKLKGPVPSLQQLIAAVNIYLTGNFFTGPVPEWTIDNNRNLDLSYNNFSVGNQEPKTCNQKNVNLFASFSRNKLGPVSCDSSNRTCTKNVTSLHINCGGNQTTIGGITYDEDIYPAGPAVYRASRNNWAISNTGHFMENNTIHTGQFLPYTTENKTRLYMPNVELYKNARVSPMSLTYYGFCLKNGVYNVKLHFAEIIFTDDNTYSDLGRRVFDVYIQGERVLKDFNIVNEAQGVGKELIKEFLAHVSCNDLEIRFYWAGKGTTNIPYKSVNGPLISALSVTYDGFSCGTKTKENSTGGMSVGVIVVIVVALVIVVILITVSVLCWRGFISDCCHLGSCWHTWVEGSWSNSNFGRHFVGNEHLLMKDLRNIELQTGVFTLHQIKVATNNFDISNKIGEGGFGPVYKGILPNSKPIAVKQLSSKSDQGTREFINEIGMISALQHPNLVKLYGCCAEGDQLLLVYEYMENNSLARALFVSEDSHLKLNWPTRKNICLGIARGLAFLHEESRLKVVHRDLKTSNVLLDEDLNPKISDFGLARLRVGDNTHISTRIAGTWGYMAPEYAMHGYLTEKADVFSFGVVISEIVSGKRNTIRQSKGEAFYLLDWAHLLNERGNIMELVDPKLGLDFNEDEVRLIIKVALLCTHVTSSYRPCMSSVLSMLEGRTMVPEFDSQCSEVMDEMKLEVMREFYSQMDENKTSDRRSLSLTKGVPWNDSSSTATDLGSP* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01121 1029 MobiDBLite consensus disorder prediction 998 1029 - -
Lapu5g01121 1029 SMART serkin_6 694 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01121 1029 FunFam Putative LRR receptor-like serine/threonine-protein kinase 770 977 - -
Lapu5g01121 1029 Gene3D Ribonuclease Inhibitor 34 195 IPR032675 -
Lapu5g01121 1029 Pfam Malectin domain 396 583 IPR021720 -
Lapu5g01121 1029 Pfam Protein kinase domain 696 897 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01121 1029 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 394 588 - -
Lapu5g01121 1029 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 663 769 - -
Lapu5g01121 1029 CDD STKc_IRAK 700 967 - -
Lapu5g01121 1029 Gene3D - 396 588 - -
Lapu5g01121 1029 Gene3D Transferase(Phosphotransferase) domain 1 770 983 - -
Lapu5g01121 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 816 828 IPR008271 GO:0004672|GO:0006468
Lapu5g01121 1029 ProSiteProfiles Protein kinase domain profile. 694 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01121 1029 Gene3D Ribonuclease Inhibitor 203 395 IPR032675 -
Lapu5g01121 1029 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 1000 - -
Lapu5g01121 1029 MobiDBLite consensus disorder prediction 1007 1029 - -
Lapu5g01121 1029 SUPERFAMILY L domain-like 57 337 - -
Lapu5g01121 1029 SUPERFAMILY Protein kinase-like (PK-like) 677 978 IPR011009 -
Lapu5g01121 1029 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 38 192 - -
Lapu5g01121 1029 Gene3D Phosphorylase Kinase; domain 1 662 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01121 Lapu-Chr5 22850882 22869096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01121 26 1025 Receptor kinase-like Gene Family AT1G53420 48.211 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g01121 Pkinase 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01121 - - vra:106779468 1696.79