Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01120 ATGAGGGTAAGTTACCCTCGTTTCTTCTTACTCCTTCATCTCCTTGCTGTCTTTTGCCTTGCCTCCTTAGCTTCTGGAGCCACTCTGCCCCAAGATGAAGTGAAAGCTCTGGAAGATATAGGTAAGACACTTGGGAAGGACTGGGATTTCAGTGTAGATCCATGCAGTGGAGAACGCAATTGGACATCTGCAGTGCAAGTGAAAGGGAGCGAAAATGAACTAAGATGCAATTGCTCCTATAACAATGCCACCGTTTGTCATGTCACCAACATAATTTTGAAATCACAAAATCTCCCTGGCACTCTCCCGCAAGATCTGTTCAGATTGCCTTACCTAGAAGAAATTGACCTTACTCGCAATTACCTGAACGGTACAATTCCTAAAGAATGGGGCTCCACCAAACTTCTCAACATCTCCCTCCTTGGAAATCGATTAACGGGTTCAATACCAAAAGAGATAGCAAACATATCAACTCTTCAAAGTTTGGTCGTGGAGGCCAATCAACTATCTGGAAATCTCCCTCTTGAGCTTGGGAATCTACCCCAAATTCAAAGATTGCTACTTTCGTCCAACAATTTTACAGGACAGTTACCTGAAACATTGTCCAAACTCACTACATTGCAGGATATTCGAATTGGGGACAATCAGTTTTCTGGGAAGATACCTGATTTTATTCAAAGTTGGACAAGTCTCAACAAACTAGTGATTCAAGGGAGTGGATTAGATGGGCCTATTCCTTCAGTAATTTCACTTCTGAAAAACTTAACTGACTTGAGAATTAGTGATCTGAATGGATCTGAACATTCACCTTTTCCACAACTTAATAACATGACGTTAAAATATCTGATTTTGAGGAATTGCAACATTAATGGAACACTACCAGTATATCTTGGGACAATGACAACTTTGAAAAACTTAGACCTCAGCTTTAACAAATTGACTGGACCAATTCCAAGTAACTATGAGGCCCTAAGAAAAGTTGATTACATATATTTAACTGGAAATCTTCTCAATGGACCAGTACCTGCATGGACAGAGAAAGCTGACAATGTAGATATTTCGTATAACAACTTCAGCATCACAAGCCAAGGGAGTTCTACATGTCAAAATGGAAATGTGAACTTGTTTTCTAGCTCAACAATCCACAATGACTCTGGAACAGATGCTTGCTTGGGAAGCAATGTCTGTCAAAAAAGCTCATACTCCCTTCATATAAATTGTGGTGGAAAGGTGCTAACAGAAACCAGAAGAACATATGATGATGATTTAGATAATGGAGGTCCAGCTAGATTTCACAGAAGTGGAACAAAAAATTGGGCATTTATCACTACTGGTAACTTTATGGATAATGATGCTGGCGACTACTCTATCTGGCAAAATAAATCGTTGCTTTCTATGGACAATGCTGACCTCTACATGGATGCACGAGTTTCTCCCACTTCTCTAACTTATTATGGATTTTGCTTGGGGAATGGAAACTACACAGTTAATCTACATTTTGCAGAAATCATGTTTATTAATGATCAAACATTCAACAGTTTAGGAACACGGGTATTTGACATCTATATTCAGGGAGAACTAGTGCAGAAGGACTTCAATATTGTAGATGAAGCAGGAGGAATTGGTAAAGCAATCATAAAAAACTTCACTGCTGTTGTGAGCAGTAATACCTTGGAGATACGTTTGTATTGGGCTGGAAAAGGGACAACTAGTCTCCCATTTAGATCAGTATATGGTCCTCTTATATCAGCTATATCGGTGGAACCTAACTTTACACCTCCCTCAGAAAATGGAAGTAGCATATCTGCAGGAGCTGTTGTCGGAATTGTGGTTGCAGGAGCAATTGTCATCATCCTTGTACTTGGTATTCTTTGGTGGAAAGGATGTCTGGGAAAGAAAAGTTCTTTAGAAAGTGAGCTAAAGGGTTTAGACCTGCGAACTGGTTTGTTTACTTTAAGACAGATCAAAGTAGCGACAAACAACTTTGATGTTGCGAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGATGTTTATCAGATGGAACACTAGTAGCAGTGAAGCAACTTTCTTCAAAATCTAAGCAAGGAAATCGTGAGTTTTTGAATGAGATAGGCATGATTTCTGCTTTGCAACATCCATATCTTGTTAAACTTTATGGATGTTGTGTGGAGGGAGATCAACTATTATTGGTATATGAATATATGGAAAACAATAGCCTTGCCCGGGCTTTATTTGGACCTGAAGAACACCAAATAAGATTGGATTGGCCAACAAGATACAAGATTTGTGTGGGTATTGCTAGAGGTTTGGCATACCTTCATGAAGAATCAAGATTGAAGGTTGTTCATAGAGACATCAAGACCACTAATGTGCTGCTTGATAAAGATCTCAACCCAAAGATATCAGACTTTGGTTTGGCCAAACTTGATGAAGAAGAAAATACTCATATCAGCACCCGAATTGCAGGGACATATGGATATATGGCTCCTGAATATGCCATGCATGGTTATTTGACTGATAAAGCAGATGTCTATAGCTTTGGAATTGTTGTCTTGGAAATCATAAATGGAAGGAGCAATACCATTCACCGCCCAAAAGAAGAATCATTCTCTATTCTTGAATGGGCACATCTGTTGAAAGAGAAAGGTGATCTAATGGAACTAGTTGATAGAAGATTGGGTTCAAACTTCAATAAAGAGGAGGTGTTAGTGATGATAAGGGTGGCTCTCTTATGCACTAAAGTTACTACAACACTTAGGCCAAGCATGTCATCAGTGGTAAGCATGCTAGAAGGAAGAACTGTCGTTGAGGAAGTGTTTTCAGAGGCAAGTGGTGAATTGGAAGAGAAGAAGATGGAGAAAATGAGACAATACTACCAAGAGTTGAATATCTCAAGGGATGAGCCATGGACTTCCTCATCTACTTCTGCAGCAGATCTTTATCCTGTAACCCTGGATTCTTCTTACTTGCAGAAGAGAAATTAG 2994 0.3951 MRVSYPRFFLLLHLLAVFCLASLASGATLPQDEVKALEDIGKTLGKDWDFSVDPCSGERNWTSAVQVKGSENELRCNCSYNNATVCHVTNIILKSQNLPGTLPQDLFRLPYLEEIDLTRNYLNGTIPKEWGSTKLLNISLLGNRLTGSIPKEIANISTLQSLVVEANQLSGNLPLELGNLPQIQRLLLSSNNFTGQLPETLSKLTTLQDIRIGDNQFSGKIPDFIQSWTSLNKLVIQGSGLDGPIPSVISLLKNLTDLRISDLNGSEHSPFPQLNNMTLKYLILRNCNINGTLPVYLGTMTTLKNLDLSFNKLTGPIPSNYEALRKVDYIYLTGNLLNGPVPAWTEKADNVDISYNNFSITSQGSSTCQNGNVNLFSSSTIHNDSGTDACLGSNVCQKSSYSLHINCGGKVLTETRRTYDDDLDNGGPARFHRSGTKNWAFITTGNFMDNDAGDYSIWQNKSLLSMDNADLYMDARVSPTSLTYYGFCLGNGNYTVNLHFAEIMFINDQTFNSLGTRVFDIYIQGELVQKDFNIVDEAGGIGKAIIKNFTAVVSSNTLEIRLYWAGKGTTSLPFRSVYGPLISAISVEPNFTPPSENGSSISAGAVVGIVVAGAIVIILVLGILWWKGCLGKKSSLESELKGLDLRTGLFTLRQIKVATNNFDVANKIGEGGFGPVYKGCLSDGTLVAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEHQIRLDWPTRYKICVGIARGLAYLHEESRLKVVHRDIKTTNVLLDKDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIINGRSNTIHRPKEESFSILEWAHLLKEKGDLMELVDRRLGSNFNKEEVLVMIRVALLCTKVTTTLRPSMSSVVSMLEGRTVVEEVFSEASGELEEKKMEKMRQYYQELNISRDEPWTSSSTSAADLYPVTLDSSYLQKRN* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01120 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Lapu5g01120 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 400 590 - -
Lapu5g01120 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 197 264 - -
Lapu5g01120 997 SUPERFAMILY Protein kinase-like (PK-like) 646 938 IPR011009 -
Lapu5g01120 997 Gene3D Ribonuclease Inhibitor 267 388 IPR032675 -
Lapu5g01120 997 Gene3D - 398 590 - -
Lapu5g01120 997 FunFam Putative LRR receptor-like serine/threonine-protein kinase 738 945 - -
Lapu5g01120 997 Pfam Malectin domain 402 585 IPR021720 -
Lapu5g01120 997 ProSiteProfiles Protein kinase domain profile. 662 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01120 997 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase isoform A 33 191 - -
Lapu5g01120 997 Gene3D Transferase(Phosphotransferase) domain 1 738 949 - -
Lapu5g01120 997 Gene3D Ribonuclease Inhibitor 199 266 IPR032675 -
Lapu5g01120 997 SMART serkin_6 662 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01120 997 Gene3D Ribonuclease Inhibitor 34 198 IPR032675 -
Lapu5g01120 997 CDD STKc_IRAK 668 935 - -
Lapu5g01120 997 SUPERFAMILY L domain-like 75 343 - -
Lapu5g01120 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 963 - -
Lapu5g01120 997 Gene3D Phosphorylase Kinase; domain 1 631 737 - -
Lapu5g01120 997 Pfam Protein kinase domain 663 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01120 997 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 631 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01120 Lapu-Chr5 22827077 22841870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01120 20 982 Receptor kinase-like Gene Family AT1G53420 56.544 0.0 1033
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g01120 Pkinase 7.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01120 - - gmx:732563 1651.72