Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01119 ATGATTTCTGCTTTGCAGCATCCTTGTCTTGTTAAACTCTATGGATGTTGTGTGGAGGGAGATCAATTATTGTTGATATACGAATATATGGAAAACAATAGCCTTGCTCGTGCTTTGTTTGGCCCTGAAGAACACCAAATAAAATTGGATTGGCCAACAAGATACAAGATTTGTGTTGGTATTGCCAGAGGTTTGGCATTCCTCCATGAGGAATCAAGATTGAAGGTTGTTCATAGAGACATCAAGGCCACTAACGTGTTGCTTGATGAAGATCTCAACCCAAAAATATCTGACTTCGGTTTGGCAAAGCTTGATGAAGAGGAAAACACTCATATTAGCACCCGAATAGCTGGGACATATGGATATATGGCTCCAGAGTATGCTATGCATGGTTATTTAACTGATAAAGCAGATGTCTATAGCTTTGGAATTGTTGTCTTGGAAATTATAAATGGAAGGAACAATATCATTCACAGACAAAAGGAAGAATCATTCTCAATTCTTGATTGGGCACATCTATTGAAAGAGAAAGGTGATCTAATGGAGCTAGTGGATAGAAGATTGGGTTCAGACTTCAATAAAAAGGAGGTGTTGGTGATGATAAAAGTGGCTCTGTTATGCACTCAGGTGACTACAACACTTAGGCCAACAATGTCATCAGTAGTAAGCATGCTTGAAGGAAGAAGTGCTGTTGAGGAAGTGGTTACAGAGACAAGTGAGGTATTAGATGAGAAGAAGTTGCAGGCAATGAGAGAATATTACCATGAGCTAAGCATAGAAGTGCCATGGACTGCTTCATCTACATCTGCATCAGATCTTTATCCAACACACCTTGATTCATCTTATTTGGACAAGAGAAATTAG 864 0.3912 MISALQHPCLVKLYGCCVEGDQLLLIYEYMENNSLARALFGPEEHQIKLDWPTRYKICVGIARGLAFLHEESRLKVVHRDIKATNVLLDEDLNPKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVVLEIINGRNNIIHRQKEESFSILDWAHLLKEKGDLMELVDRRLGSDFNKKEVLVMIKVALLCTQVTTTLRPTMSSVVSMLEGRSAVEEVVTETSEVLDEKKLQAMREYYHELSIEVPWTASSTSASDLYPTHLDSSYLDKRN* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01119 287 SUPERFAMILY Protein kinase-like (PK-like) 2 237 IPR011009 -
Lapu5g01119 287 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 237 - -
Lapu5g01119 287 Pfam Protein tyrosine and serine/threonine kinase 2 224 IPR001245 GO:0004672|GO:0006468
Lapu5g01119 287 SMART serkin_6 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01119 287 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01119 287 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 257 - -
Lapu5g01119 287 ProSitePatterns Serine/Threonine protein kinases active-site signature. 76 88 IPR008271 GO:0004672|GO:0006468
Lapu5g01119 287 Gene3D Transferase(Phosphotransferase) domain 1 31 243 - -
Lapu5g01119 287 Gene3D Phosphorylase Kinase; domain 1 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01119 Lapu-Chr5 22820650 22822633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01119 1 281 Receptor kinase-like Gene Family AT1G53420 63.158 8.21e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g01119 PK_Tyr_Ser-Thr 6.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01119 - - cam:101501658 483.411