Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01112 ATGGAGAATCAGCCTTCAAACGGAAGAAAGGCAATGGAAGAAGAGCTAATCAAAGGGCGCAACACAGCAAACCAGTTACTCGAAATACTTGTTCATAAATCCAACACTCGTCATGGAGATACAGACGTTGAAGGGTTAGTGTTTCCAGTTGCTGAAGATCTTGTTCGCAAGGTACTGAGATCGCTCTCAAATACCCTTTTTCTGTTGAACACTCAAAGTGATGTTTCCGATGGGGTTGTTATGCCTATCACCACTATCACTGATGTCTCTTCGTCCCTGAAATGCCCTAAGCTTGAGGACAAGGATGGGGTTTGCAAGGGTTCCATCAACGCTAAAAGACGAAAAGGGTGCCACAAGAGAAATGCACCAACATGGGAGAAGAACAGCTCACATCTGATGGAAGATGGCTATCCATGGAGAAAGTATGGACAGAAAATGACCATGAATGCAAAATACCTCAGGAGCTACTACAGATGCACTCACAAGTATGATCAAGGTTGTCCAGCAACCAAACAGGTTCAAAGGATTCAAGAGGACCCTCCATTGTACCGAACAACTTATTATGGTCATCACAATTGCAAAATTTCTTTAAGTCCAGAAATAATGTTGGAACCGGCTTCTTCTTCTGACTCTTCCATGCTCCTTAGCTTCAGTACCACCTTCCCAACCAAAGAAGAATACCAATTTTCATCATCACTATTTTCATCCACGAAACAGGAGCCAATGGAAGTGATTCCGGATGACTGTGGTACACACAACCAATTACCCTCATCAGATTATCATCTGTTATGTGACTATGAACTTGATTTCAATTGTTCGAGGCATGATACTATGCAGTCTATGCTATCCTCCACTGAATCTGTTCAATTTGATAAAGTTTATGGGAGTGGTATGGATTTTGATGGCTAG 909 0.4224 MENQPSNGRKAMEEELIKGRNTANQLLEILVHKSNTRHGDTDVEGLVFPVAEDLVRKVLRSLSNTLFLLNTQSDVSDGVVMPITTITDVSSSLKCPKLEDKDGVCKGSINAKRRKGCHKRNAPTWEKNSSHLMEDGYPWRKYGQKMTMNAKYLRSYYRCTHKYDQGCPATKQVQRIQEDPPLYRTTYYGHHNCKISLSPEIMLEPASSSDSSMLLSFSTTFPTKEEYQFSSSLFSSTKQEPMEVIPDDCGTHNQLPSSDYHLLCDYELDFNCSRHDTMQSMLSSTESVQFDKVYGSGMDFDG* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01112 302 Gene3D WRKY domain 120 196 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g01112 302 ProSiteProfiles WRKY domain profile. 128 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01112 302 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 215 IPR044810 GO:0003700
Lapu5g01112 302 Pfam WRKY DNA -binding domain 134 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01112 302 SUPERFAMILY WRKY DNA-binding domain 129 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g01112 302 SMART WRKY_cls 133 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01112 Lapu-Chr5 22556678 22558446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01112 15 193 WRKY Transcription Factor Family AT3G56400 36.111 1.34e-30 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu5g01112 WRKY 1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01112 - - gmx:102663141 415.231