Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01111 ATGGAGAATCAGATTCCAAATGGCGAAAAGGCAATGGAAGAAGAGCTGAACAGAGGGCGTGACATGGCAAATCAGGTGCTTGAAGTGCTTGCTCATGATAAATCCATCACTCATCTTGAAAAGGAAGAAGGGTCAAAGTCAGTGTTACCATTTGTTGAAGATCTTGTGCGAAAGGTTTTGTGTTCATTCACAAATACCCTTTGGCTTTTGAACTCCAGCAACGATGTTTCCCATGAGATGGCTGCGTCCATCACTCTCAGAGATGTCTCTTCGTCCACCAGTAATTCCCAAAAGAAGTTGGAGTCTGTGGATGAATCTTGCAAGAGTCGCAATATTCTCAGCACTGAAAACCGAAGAAGAGGCTACAAGAGAAAATCAATTGCGCCAACTTGGGAGAAGGACAGCTCCATACTGGTTGAAGATGGCTATGTATGGAGAAAGTATGGACAAAAAATGACATTGAACGCCAAATACCTCAGGAGCTACTACAGGTGCACTCACAAGAATGATCAGGGATGCCAAGCAATGAAACAGGTGCAGAGAATTCAAGATGATCCTCCTATGTACCGAACAACCTATTTTGGCCATCACACTTGTAAAAGCCATATAAATCCCGAGATTGTTTTGGAACCTCTTTCTCCCTCTGCCTCTTCCACATTACTTAGCTTTAATATTAACAGCCTTCATAGCAAACAAGAAAACCCGTTTCCCTCATCACTACTTGCTTCAACCAAACATGAGCTCATGGAAGTGATTCACGATGAACATAGTGCTCAGAATCAACTATCCTCTCTCGAAGACATCTTATTATATGATTGTGAAGTTTATTGCGATTATTCAAGGCATCTGGCTATGCCATCATCAACTGAATCCGTTGAATTTGAGAATGTTTTTACGAGCAGTTTGGATTTTGCAGGCTAG 921 0.4202 MENQIPNGEKAMEEELNRGRDMANQVLEVLAHDKSITHLEKEEGSKSVLPFVEDLVRKVLCSFTNTLWLLNSSNDVSHEMAASITLRDVSSSTSNSQKKLESVDESCKSRNILSTENRRRGYKRKSIAPTWEKDSSILVEDGYVWRKYGQKMTLNAKYLRSYYRCTHKNDQGCQAMKQVQRIQDDPPMYRTTYFGHHTCKSHINPEIVLEPLSPSASSTLLSFNINSLHSKQENPFPSSLLASTKHELMEVIHDEHSAQNQLSSLEDILLYDCEVYCDYSRHLAMPSSTESVEFENVFTSSLDFAG* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01111 306 Gene3D WRKY domain 120 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g01111 306 SUPERFAMILY WRKY DNA-binding domain 136 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g01111 306 ProSiteProfiles WRKY domain profile. 134 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01111 306 Pfam WRKY DNA -binding domain 140 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01111 306 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 16 206 IPR044810 GO:0003700
Lapu5g01111 306 SMART WRKY_cls 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01111 Lapu-Chr5 22508052 22510206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01111 15 201 WRKY Transcription Factor Family AT3G56400 39.362 1.78e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu5g01111 WRKY 8.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01111 - - var:108332714 513.457