Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01110 ATGCATTGTGTGATTGAGTTTAGTGCTCTATGTCTTTATGTCGAAGAACCTAAAGCTGGAAAACCAGTACTGAACTGGGCCAGGCGACACAAGATTGCATTAGGCATAGCGAGAGGTCTAGCTTATCTTCACACAGGACTAGAAGTTCCTGTCACTCATGCAAATGTAAGGTCCAAGAATGTGCTTGTGGATGACTTCTTTGCAGCCAGGCTAACTGATTTTGGCCTGGACAAGCTAATGATTCCTTCCATAGCAGACGAAATGGGTGCGCAGGCCAAGACTGATGGCTATAAGGCCTCCGAGCTTCAAAGGATGAAGAAATGCAACTTTAGGACTGATGTATATGCTTTTGGCATACTACTGCTTGAAATCTTGATTGGGATAAGAAGTCCTATGGAAGATGGGTTGGTGCAGGCACTGAAGTTGGCAATGGGGTGTTGTGCACTTGTGGCATCTGTGAGGCCAAGCATGGATGAAGTTGTGAGGCAGTTGGAGGAGAATAGACCAAGGAATAGGTCTGCATTATACAGCCCTACAGAAACAAGAAGTGGAAGTGTTACACCATTTTGA 570 0.4526 MHCVIEFSALCLYVEEPKAGKPVLNWARRHKIALGIARGLAYLHTGLEVPVTHANVRSKNVLVDDFFAARLTDFGLDKLMIPSIADEMGAQAKTDGYKASELQRMKKCNFRTDVYAFGILLLEILIGIRSPMEDGLVQALKLAMGCCALVASVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSVTPF* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01110 189 SMART tyrkin_6 6 164 IPR020635 GO:0004713|GO:0006468
Lapu5g01110 189 Gene3D Transferase(Phosphotransferase) domain 1 11 182 - -
Lapu5g01110 189 SUPERFAMILY Protein kinase-like (PK-like) 20 165 IPR011009 -
Lapu5g01110 189 Pfam Protein tyrosine and serine/threonine kinase 21 134 IPR001245 GO:0004672|GO:0006468
Lapu5g01110 189 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 131 167 - -
Lapu5g01110 189 ProSiteProfiles Protein kinase domain profile. 1 189 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01110 Lapu-Chr5 22491876 22495695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01110 14 189 Receptor kinase-like Gene Family AT3G24660 63.889 1.42e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu5g01110 PK_Tyr_Ser-Thr 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01110 - - gmx:100814814 300.056