Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01109 ATGGAGACTCAGTTTTCAAATGGAAAAAAGGCAATGGAAGAAGAATTGATCAGAGGGCGTGACATGACACACCAGTTACTTGAAGCACTTGACCATGATAAATGGAACACTCATCTTCACGAGGAGGGTTGGTCAAAGTCAGTGTTTCCATTTGTTGAGGATCTTGTGCGCAAGGTCTTGTGCTCATTCACAAACACTCTTTTGCTTTTGAACTCCAATAGTGATGTCTCCAATGAAGTGACACCATCTCTCTCCCTCAGAGATGTCTCATCATCAACGAGTTGCCCAGAGATTGAGTCTGTGCATGAAACTTGCAAGAGTCGCAATATTCTCAACCCTAATAATCGAAGAAGGTGCTACAAGAGAAAATCAATTGCTCCAACTTGGGAGAAGGACAGCTCAATACTGATTGAAGATGGCTATGCATGGAGAAAGTATGGACAAAAAATGACACTGCACGCAAAATACCTCAGAAGCTACTACAGGTGCACTTACAAGAATGATCAGAGATGCTCAGCTCTGAAACAGGTGCAGAGAATTCAAGATGATCCTCCTATGTACCGAACAACCTATTATGGCCATCACACTTGTAGAAGCCCTATGAATCCCGATATCATTTTGGAACCTCTTTCTCCCTCTGCCTCTTCCACATTACTTAGCTTTAGTAACAGCCTTCAAAGCAAACAAGAAAACCCGTTTCCCTTTCCATTACTTGAATCAATCAAACATGAGCCCCAGAAAGTGATTCACGATGACCATGGTACTCAAAACCAGTTGTCCGCGTTAGAAAACCTCCTATTATACGATTATGACATTTCTTTTTGA 825 0.4194 METQFSNGKKAMEEELIRGRDMTHQLLEALDHDKWNTHLHEEGWSKSVFPFVEDLVRKVLCSFTNTLLLLNSNSDVSNEVTPSLSLRDVSSSTSCPEIESVHETCKSRNILNPNNRRRCYKRKSIAPTWEKDSSILIEDGYAWRKYGQKMTLHAKYLRSYYRCTYKNDQRCSALKQVQRIQDDPPMYRTTYYGHHTCRSPMNPDIILEPLSPSASSTLLSFSNSLQSKQENPFPFPLLESIKHEPQKVIHDDHGTQNQLSALENLLLYDYDISF* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01109 274 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 30 217 IPR044810 GO:0003700
Lapu5g01109 274 Gene3D WRKY domain 121 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g01109 274 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01109 274 ProSiteProfiles WRKY domain profile. 132 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01109 274 Pfam WRKY DNA -binding domain 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01109 274 SUPERFAMILY WRKY DNA-binding domain 134 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01109 Lapu-Chr5 22486126 22487718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01109 1 199 WRKY Transcription Factor Family AT3G56400 37.500 7.38e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu5g01109 WRKY 8.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01109 - - gmx:100792193 411.764