Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01107 ATGGAGAATCATCCTTCAAACGAAAGAAGGGCAATGGAAGAAGAACTAATCAGAGGGCGTGACATAGCAAACCAGTTACTTGAAGTGTGTGTTCATAAATCCAACACTCGTCATCATCACGAAGATGTACAAGGGTCAATGCTTCCCTTTGTTGAAGATCTTGTGCGCAAGTTGCTGTGTTCATTCACAAACACCCTTTTGCTTTTGAACACTGATTGTGGTGTTTCTAATGAGGCTGCTATGCCTATCACTGTCAAAGATCTCCCTTCGTTTGTGAAATGTCCAAACCCTCAGGATATGGATGAGGTTTGCAAAAAGAGTTTCTTCCAAACTAAAAAACCAAGAGGGTGCTACAAGAGAAAAAGCTACTATAGATGCACTCACAAATATGATGAGGGTTGTCCAGCAATTAAACAGGTTCAGAGAATTCAAGAAGACCCTCCATTGTACCAGACAACATATTATGGTCATCACAATTGCAAGAGCTCCTTAAGTCCAGATATAATGATGGAATCAGCTTCTCCTTCTGGCTCTTCTATGTTCCTTAGCTTCAATAACACCTTCCCTACCAAAGAACAATACCAATTACAGTCATCTTCACTTTCTTCATCCACGAAACAGGAGCCAGTGGAAGTGATTCAGGATGAACTTATTGCTGATCACAGCCCATTATCAGATTACCTCCTGTTATGTGACTATGAACTTGATTTCAATTATATGAGGCATGTTACTATGCCACTTTAG 744 0.4032 MENHPSNERRAMEEELIRGRDIANQLLEVCVHKSNTRHHHEDVQGSMLPFVEDLVRKLLCSFTNTLLLLNTDCGVSNEAAMPITVKDLPSFVKCPNPQDMDEVCKKSFFQTKKPRGCYKRKSYYRCTHKYDEGCPAIKQVQRIQEDPPLYQTTYYGHHNCKSSLSPDIMMESASPSGSSMFLSFNNTFPTKEQYQLQSSSLSSSTKQEPVEVIQDELIADHSPLSDYLLLCDYELDFNYMRHVTMPL* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01107 247 SUPERFAMILY WRKY DNA-binding domain 112 161 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g01107 247 ProSiteProfiles WRKY domain profile. 112 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01107 247 Gene3D WRKY domain 98 163 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g01107 247 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 121 191 IPR044810 GO:0003700
Lapu5g01107 247 SMART WRKY_cls 105 162 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g01107 247 Pfam WRKY DNA -binding domain 112 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01107 Lapu-Chr5 22419270 22420638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01107 1 163 WRKY Transcription Factor Family AT3G56400 27.136 1.42e-16 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu5g01107 WRKY 2.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01107 - - vra:106778123 374.785