Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01092 ATGAGCGCTTCTTTCACTGTCTTTTACCGGAGATGGTTCGCCGAGCTAAAGGAGGTGGCGCAGCGCCTGAAGAATGAGCGGAGCCAGGAGGTGATGGACAAGCTCATGCGGCAGCACCGGGACTACTACAGAGCAAAATGGGTGGCAGTTGAGAATGACCCTCTCTGCATGTTCCTTTCACCCTGGACCACCAGGCTTGAACGCTCCCTCCACTGGATCACGGGCTGGCGCCCCACCACGGCCTTCCACCTCATCTACACTGAGTCCTCTGTCCTCTTTGAGTGTCACATCATCGATATCCTCCATGGCCTCCGCACCGGCGACCTCGGTGACCTCAGCCCCTACCAGTTTCGCCGTGTGAAAGAAGAGAATGCAATCACAGAAGAGCTATCAGAGTGGCAGGACAGTGCAAGCGAAATGGTGGGTGGAGGGATGGAGATGAATGAGAAGATCACCGAGCTGGTACCCATCATAAAAAAAGCAGATGATCTACGGATAAGAACACTCGAGAGCTTGGTAAGGTTGCTGTCCAAACAGCAGGCTATCGAATTCCTCATTGCCTCAGCCGAATTACTCATTGGGATTCGCTGTTGGGGAATTAATCAGGACCCTCCATCTCAGTAA 624 0.5337 MSASFTVFYRRWFAELKEVAQRLKNERSQEVMDKLMRQHRDYYRAKWVAVENDPLCMFLSPWTTRLERSLHWITGWRPTTAFHLIYTESSVLFECHIIDILHGLRTGDLGDLSPYQFRRVKEENAITEELSEWQDSASEMVGGGMEMNEKITELVPIIKKADDLRIRTLESLVRLLSKQQAIEFLIASAELLIGIRCWGINQDPPSQ* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01092 207 Pfam Seed dormancy control 16 87 IPR025422 GO:0006351|GO:0043565
Lapu5g01092 207 ProSiteProfiles DOG1 domain profile. 2 205 IPR025422 GO:0006351|GO:0043565
Lapu5g01092 207 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 4 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01092 Lapu-Chr5 22141707 22142975 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01092 4 197 bZIP Transcription Factor Family AT5G06960 24.091 1.12e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01092 - - pvu:PHAVU_005G081900g 330.872