Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01082 ATGGCTACCTTCTCCAAGGAACGCGAAAACTTTGTCTATGTTGCCAAGTTAGCTGAACAAGCTGAACGTTATGATGAAATGGTGGACGCAATGAAGAAGGTGGCCAAGCTGGACGTTGAGTTGAGTGTGGAGGAGAGGAACTTGTTCTCTGTTGGATACAAAAATGTGGTGGGGTCACGGAGAGCTTCATGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAGTCAAAAGGGAATGAGTTGAATGTTAAGCGCATAAGGGATTATAGGCACAAGGTGGAGTTGGAGCTGTCTAACATTTGCAGTGACATTATGATAATTTTAGATGAGCATCTTATTCCATCCACTAATATTGCGGAGTCCACAGTGTTTTATTATAAGATGAAAGGAGACTACTACCGATATTTGGCAGAATTCAAAGCTGGTGATGAAAAGAAAGAGGTAGCTGATCAGTCACTTAAAGCATATCAGACAGCTGCTACCACTGCTGAGAGTGAATTACAACCTACACATCCTATTCGTTTGGGTCTGGCTCTAAATTTCTCTGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCCTGCCACCTTGCTAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTAGATACCCTGAATGAGGAATCTTACAAGGACGGTACCTTGATCTTGCAGCTGTTGAGGGATAACCTTACTTTATGGACATCTGATATCCCTGAAGAGGGTGAGGACCAAAAAATGGACGGCACAGCAAGGAATGGTCAAGGAGAAGATGAGTTAGGTCGCTAA 792 0.4318 MATFSKERENFVYVAKLAEQAERYDEMVDAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSSIEQKEESKGNELNVKRIRDYRHKVELELSNICSDIMIILDEHLIPSTNIAESTVFYYKMKGDYYRYLAEFKAGDEKKEVADQSLKAYQTAATTAESELQPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDDAVSELDTLNEESYKDGTLILQLLRDNLTLWTSDIPEEGEDQKMDGTARNGQGEDELGR* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01082 263 Gene3D - 2 250 IPR036815 -
Lapu5g01082 263 MobiDBLite consensus disorder prediction 239 263 - -
Lapu5g01082 263 PANTHER 14-3-3 PROTEIN 8 239 IPR000308 -
Lapu5g01082 263 PIRSF 14-3-3 2 249 IPR000308 -
Lapu5g01082 263 FunFam 14-3-3 protein epsilon 3 249 - -
Lapu5g01082 263 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Lapu5g01082 263 SMART 1433_4 8 249 IPR023410 -
Lapu5g01082 263 MobiDBLite consensus disorder prediction 240 263 - -
Lapu5g01082 263 Pfam 14-3-3 protein 15 236 IPR023410 -
Lapu5g01082 263 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Lapu5g01082 263 Coils Coil 14 34 - -
Lapu5g01082 263 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Lapu5g01082 263 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Lapu5g01082 263 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Lapu5g01082 263 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Lapu5g01082 263 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Lapu5g01082 263 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01082 Lapu-Chr5 21874016 21878464 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01082 6 260 14-3-3 family AT2G42590 76.654 1.21e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01082 K06630 - gmx:100806167 489.574