Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01081 ATGTCCAATAGCAAGTCCGTTCTATCTGTTGTGGCCTCCCTTGCAGCTTCAGCTATGCTGATGAGAAGTATTACCAATGAGTTCGTTCCTCATGAAGTCTTGGACTTTTTTCACTTAGGACTTCACAATCTATCTCGTAAGTTCTCCACCCGACTCACTGTTGTCATTGAAGAATTTCAAGGCATGTCCAGAAACCAAGTGTTTGAGGCTGCAGAGGCCTATCTTACCACCAAAGCCACTATCTCAGCTCAGAGAGTTAAAGCAAGCAAATCCGAGAATGATAAAAATCTATCATTTGGTGTAGACAGAGATGAAGAAGTGAATGATGAGTTTGAAGGGGTTCAAGTAAGGTGGAAATACATATGTCAACAAGCTGAGTCAATCCGAAACAAGCATCGTGATATGAATGCCTCTCTAAAGTCAGAAATAAGGTACTATGAGCTAAGTTTTCCAAAGAAACACAAGGAGAAGATATTCAGTTCATATTTTCCACACTTGTTAGAGAGAGCCAAGGCCATCAAAGAAGAAAATGAGGCAGTGAAGCTTCACACGGTTGATTATAGAGATTATTGGAAAGTTCCCGGCATCAAAATTGGTCACCCCATGACTTTCAAGACTCTTGCAATTGATGCAGAACTTAAGAGGGAAATAGTGAATGATTTGGACAACCCTCCTGGCACTGGCAAGTCTAGCCTTATTGCTTCCATGTCCCATTATCTGAACTATGATATCTATGACTTGGATCTCACCACTGTCCAAGACAATAGTGAACTAAAAAATTTGATCCTAGCCATGTCTAACCGTTCCATGCTCGTGATAGAGGACATTGATTGCACTATAAAGCTGCAGAACCGAGAAGAAGATGGAGAAGCGGTTAAGAATGGAGAAAATAAGGTAACACTTTCAGGAGTGTTGAATGTTATAGATGGTCTATGGTCATGCTGTGGAGAGGAACGAATTTTTATTTTCACAACCAATCACAAAGAGAAGCTAGATCCTGCTCTGTTAAGACCTGGCCGAATGGACATGCACATTCATCTGTCATACTGTAACTTTTCTGCTTTTGAGCAATTGGCCTTCAATTACCTTGGAATTTCTCAGCACAAACTCTTTGACCAGATTGAAGGGCTTCTGAGAGAAGTACAAGTGACTCCAGCTGAAATTGCAGGAGAGCTAATAAAGATCTCTGATGTTAGAGAAGGACTACAAGACATTCTCAAATTCCTCCACAACAAGAAAATGCTGCAGGGACAGACTATCTAA 1263 0.4093 MSNSKSVLSVVASLAASAMLMRSITNEFVPHEVLDFFHLGLHNLSRKFSTRLTVVIEEFQGMSRNQVFEAAEAYLTTKATISAQRVKASKSENDKNLSFGVDRDEEVNDEFEGVQVRWKYICQQAESIRNKHRDMNASLKSEIRYYELSFPKKHKEKIFSSYFPHLLERAKAIKEENEAVKLHTVDYRDYWKVPGIKIGHPMTFKTLAIDAELKREIVNDLDNPPGTGKSSLIASMSHYLNYDIYDLDLTTVQDNSELKNLILAMSNRSMLVIEDIDCTIKLQNREEDGEAVKNGENKVTLSGVLNVIDGLWSCCGEERIFIFTTNHKEKLDPALLRPGRMDMHIHLSYCNFSAFEQLAFNYLGISQHKLFDQIEGLLREVQVTPAEIAGELIKISDVREGLQDILKFLHNKKMLQGQTI* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01081 420 Pfam Domain associated at C-terminal with AAA 29 121 IPR025753 -
Lapu5g01081 420 PANTHER BCS1 AAA-TYPE ATPASE 223 413 - -
Lapu5g01081 420 Gene3D - 346 415 - -
Lapu5g01081 420 Pfam ATPase family associated with various cellular activities (AAA) 224 348 IPR003959 GO:0005524|GO:0016887
Lapu5g01081 420 Gene3D - 196 345 IPR027417 -
Lapu5g01081 420 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 398 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01081 Lapu-Chr5 21867531 21868863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01081 223 347 Calmodulin-binding Proteins AT3G56690 27.068 1.32e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01081 K08900 - gmx:100778503 581.637