Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01058 ATGGCACAGTTACCTCCCAAAATACCAACCATACCCCAAAATTGGCCATCTTTTCCTCACCAAAGGGTGCCCACAATGGCCAACTTCACCCCCACAACCTCCTCCACCACCACCGTCTCCGCCGCCACCACCACTCCCTCCCAAACCTCTTGGGTCGACGAGTTCCTTGACTTCTCCTCCACCCGGCGGGGGGCTCACAGGCGATCCGCCAGTGACTCCATTGCCTTCCTCGAGACGCCGTTTCTCGAGGAATGTCGAGCCGGTTTCGACCGACTCGACGAGGATCAGCTGATTTCCATGTTCTCTGACGACATTGCCGCAGCGGCGCTCCCGCCGCCGCCGCTTTCCTCGACGTCCAACCCCTCCTCGCCGTCCTCCGACCAAAATAGCAACAACGACGAGAAGCCCATGGCAATGGCCTTGGACGTGAAGCCGAAAACGGAAACTGTTGAAGAGGAGAGCTCGTGCAAGAATGAGGCGGCGGCGCTGCAACTCTCCGCCACTGGCACCTGCCCTGAAACTGTTGTCGATCCCAAGAGGGTCAAAAGAATTTTGGCTAACAGGCAATCTGCACAGAGATCAAGGGTAAGAAAGCTACAATACATCTCTGAGCTTGAAAGGAGCGTGACAACTTTGCAGACGGAGGTATCAGCATTGTCACCACGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGTATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGACGCTCATCAAGAGGCATTGAAGAAGGAAATAGAGAGACTGAGGCAAATCTACCACCAACAGAACCTACAGAAGATGGGTAACACAGTGAACAACAATGTTCAAACCCCACCAACATCACAGCCACAAGCACAAATGCAATCACATTCCCTTCATCAGCATCAGCATCAGCATCAGATATCAGTGTCTCAAGCATTGGGATGCAAGGACAAGGAGCAGCTCCTGAGTTGA 993 0.5257 MAQLPPKIPTIPQNWPSFPHQRVPTMANFTPTTSSTTTVSAATTTPSQTSWVDEFLDFSSTRRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSTSNPSSPSSDQNSNNDEKPMAMALDVKPKTETVEEESSCKNEAAALQLSATGTCPETVVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMGNTVNNNVQTPPTSQPQAQMQSHSLHQHQHQHQISVSQALGCKDKEQLLS* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01058 330 Coils Coil 258 278 - -
Lapu5g01058 330 Gene3D - 178 277 - -
Lapu5g01058 330 MobiDBLite consensus disorder prediction 120 135 - -
Lapu5g01058 330 SMART brlzneu 175 239 IPR004827 GO:0003700|GO:0006355
Lapu5g01058 330 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 177 229 IPR004827 GO:0003700|GO:0006355
Lapu5g01058 330 FunFam Basic leucine zipper 61 178 251 - -
Lapu5g01058 330 SUPERFAMILY Leucine zipper domain 179 233 IPR046347 GO:0003700|GO:0006355
Lapu5g01058 330 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 182 197 IPR004827 GO:0003700|GO:0006355
Lapu5g01058 330 PANTHER BASIC LEUCINE ZIPPER 34 1 303 - -
Lapu5g01058 330 MobiDBLite consensus disorder prediction 108 135 - -
Lapu5g01058 330 MobiDBLite consensus disorder prediction 282 317 - -
Lapu5g01058 330 Pfam bZIP transcription factor 179 223 IPR004827 GO:0003700|GO:0006355
Lapu5g01058 330 CDD bZIP_plant_RF2 180 230 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01058 Lapu-Chr5 21416733 21420148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01058 1 257 bZIP Transcription Factor Family AT3G58120 53.265 1.42e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu5g01058 bZIP_1 7.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01058 - - gmx:100820197 462.996