Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01050 ATGCGATCATCGCCGTCTTCATTGGGTTCTTCGTCTCGATCGGGTTTGCGGCTTCGTAAGAAGCACAAGAGGTTGGATGCAATATGTGAGGATGAGTACACTCGAAACCATGGTGAGTTGAATGAGGAAAATGATGGGCTGGACCCTGATGCAGGGGTTCGTCGGAGCTCCCGGGTTCGCCGTGCCCCGGTGCTGCTCGACGCATCTCCCGCTCCGCCGAAGAAACGACGGAGGGTGGGGAAGGGTGGAATTGGTCGTGGTGTGGAGAGTCCTTCGAGTTTAGGGCGGGAAAATAGAGGTTCAGGTGGGGCTTGGACTTCTAGGTTGAGATCAAGGGTTGTCAATGTACGTTTTAGAGTAAAAGAGGAGAAGGAATCGCCACGTGGGAAGAGGAGGCTTTTTGGGGATGTGGTGGAAAAAAGGGGTGATGATGAGGTTGATAGGAAGGAGGAGTTGGAAGGTTTGATGCCTAAAGTGGTTAAGTCGAAGAGACCGGGGAGGATTAAAGCCACAAAGCACGATGAAGGGCATGAAGATGATCTGTCTCATGGGAGTTTGGAGGAGAGTAAGAGTCAGGAAGTGGTGCTTGTGTCAAGCAGTGATGAGGAGAGTGATTCTGAATCGGAAACTGAATTGTCGGAAGAGGAAATGATGGATGAATCGGATGGAAATGCCCCTTCTATGGTAGGAAATGAGGATGGGGATCAGATGGATGATTCGGATGGGAATGTCCCTCCAATGGTAGAGAATGAGGAGAGGAACTTATCCCACGATTTGCAAATGGAGGAGTGTGGCGATGACATTGAATCCTCGACACAGGTGGAACATGAAGATAAAGTGGACTATCAGTTAGAGGGTGCGAAGGAAAGTAAAAGTGTAGGTAATGCAGCTGAACAGGTAGATAATGAAGGATTCGTTAGTAAGGAGGTTGATGATGGTGAAAATGTCTTGAAAGATGCAAATGTTGATAAGAAGATTGATGATGGTGAAAATGTCTTGAAAGATGCAAATGTTGATAAGGAGGTTGATGCCAATGACAATGTCTTGAAAGATGCAAATACTGGGAGGAACGATGAGTTGAAACATGCTTCAAATGACAAGCGTGGTCACCTGCGTATCAAAGAGGGCAGGCGGTGTGGTTTGTGTGGTGGAGGGACCGATGGTAAGCCTCCAAAAAGGTTAGCTCAGGATAATGGTGAAAGTGAGAATGAAGCTTATAGTGGATCCTCATCTTCAGAAGAGACTAATTATGATATTTGGGATGGTTTTGATGATGAACCTGGTTGGCTTGGGCGTCTCTTGGGTCCTATTAACGATCATCATGGTATTGCTAGAATATGGGTTCATCTGCACTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCCAACTTTGGATGCTTAAAAAATGTGAGGGCTGCACTTTTCCGTGGGAGGGCATTGAAGTGCACACGCTGTGGGAGGCGAGGGGCAACCACTGGTTGTCGTGTTGATCGTTGTCCAAGAACTTATCACTTGCCTTGTGCCAGAGCCAGTGGTTGCATCTTTGATCATCGTAAATTTCTCATTGCCTGCACAGATCATCGGCATCTCTTCCAACCTCGCGGTAATAAATATTTAGCTCGGATAAAGAAATTAAAGGCTAGGAAAATAATGTGGGAGATAAGGAAGCAATCAAACGAAGCTTGTAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCAGTGTACATTGGGGGTTCTGGCTCTGCTAGTGAAAATTCGTTTGAGGGTTGGGAATCTGTTGCTGGGCTCAAAGATGTCATCCGATGTATGAAAGAAGTTGTCATTTTACCTCTGTTATATCCTGAGCTTTTTGATAATTTAGGGCTTACACCACCTAGAGGTGTTCTTTTGCATGGGCATCCTGGAACAGGGAAAACCTTAGTTGTCCGGGCATTGATAGGTGCATGTGCCCGTGGGGATAAGCGGATTGCATATTTTGCCCGGAAAGGTGCAGATTGCTTGGGAAAGTATGTTGGCGATGCCGAGCGTCAACTAAGACTATTGTTTCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGTCTGGCACCCCTCCGCACCAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACATTGCTTGCTCTTATGGATGGTCTGAAATCTAGGGGTTCAGTTGTGGTCATAGGTGCGACAAACCGTCCTGAAGCTGTTGACCCAGCACTTAGGCGCCCTGGTAGATTTGATCGGGAAATATATTTTCCATTACCATCAATTGACGACAGAGCTTCCATTCTCTCACTTCACACCCAGAAGTGGCCAAAACCAGTTACTGGATCCTTGCTTGAGTGGATTGCTAGAAAAACACCAGGCTTTGCTGGTGCTGATCTCCAAGCTCTCTGTACACAAGCAGCTATTAATGCGTTGAAGAGGAATTTCCCTTTGCAAGAAGTCTTGTCTTTGGCTGCTAAAGAAAAACATTCTGGTTCTAAGCAACTTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGACTGGATAGAGGCTGTTTTTTCTTCCCCACTACCTTGCTCCCGAAGAGATGCTGGAAATGCTGCCAATGATGTAGTATGCTCACCGCTTCCCATCCAACTTATTCCTTGTTTATTGCAGCCATTATGCACGCTTCTTGTATCTCTATATCTTGATGAACGTCTATGGTTACCACTTCCCATATCGAAAGCTGTAACTGTGATAAAGGATGCTATGATTTCTGCTCTTGACAAAAAGCAAAAGCCTTTTGATCACTGGTGGTTGCACATGGATGATTTTCTTCACGAATCCAATACTGTGTATGAGTTGAAGAGGAAGCTTACTTGTTCTGGCATTTTGTCTGCGGATGATGGCATTAACAGTTCAAATGATTGTGTGGATGATGCTAATGATAACAACCTGATCTTAGAATCCTCCACAAGGAACCATCTTGGCATGCGTAGTGGTTTGTTTGCATTGGCTAACAAATCAGGATTTCGGATATTAATTTCTGGAAATCCACGATCTGGCCAGAGACATCTTGCTTCTTGTCTTCTTTACTGCTTTATAGGAAATATTGAAATACAGAAGATTGATATGGCAACTATTTTACAAGAAGGGCATGGAGAAGTGGTGCAGGGGATTGCAGAAATATTAATGAAATGTGCTAGCAGGCAATCTTGCGTAGTATTCTTGCCAAGAATTGATTTGTGGGCTCTGGAGAAACATTTTCAAATTGCTGAAAGGACTGATTCGTGTTTAAAGATTGGCAAGTCTTGTTTCACACCAAACCAAGTTGTTGAGAAGGAAAGTGAGATCAGTACTGAAAAAAACTCAACTGAGATGGCCAATGGCCAAGCCATCACCAAGGCTTCATTTGCTTGGATGTCATTTATTGAGCAGGTGGAATCCATTGGTGTATCCACATCCTTGATGATTCTGGCTACTTCAGAAGTTCCCTATAAAGAACTTCCTCGCAAAGTAAGAGAATTCTTCAAGAGTTATCAATCTAAAGACGGCCAGTCAATTCCTTTGGAGCAGACAGTTCCTCGTTTCTCTGTGCAGATTGATGAGAATTTTGACCATGACATGGTGATCAATTTATCTGCACTAGAGCTATTGAGAAATGTAGTTGAGCAGCTGGTTCAATTGATTCATCAGAGATCTCATGTTGGTGGCCAAAAGGGCCACAAAACCTATGAATCAATTGAAGTTTGTAAAGATAAGGTATGTCAAAGAAAAGAGGGATCAGCCAATGATAAAAAGAGTGAAATCCAACTTGAGTCCTTTACAAAAGTTCCGCCAACACCAAACAGCAGCAAGTCACTTAAGGGAAAGTCAACCCTGTTGTTGGCAATATCTACACTTGGCTATCAAATTCTCTTGTACCCACATTTTTCTGAACTTTGTTGGGTCACTTCAAAACTCAAACGAGGTCCTTGTGCTGATGTAAGTGGACCTTGGAGGGGCTGGCCTTTCAATTCTTGTATAATTCGTCCTAGTAATTCACACGACAAGGTTGTAGTTTCTTGTAGTTCTGCTAGCATTAAAAGCAGAGAAGCATCTGGTCTAGTCAGAGGCTTGATTGCTGTTGGTTTATCAGCTTACAGAGGTGTTTATACATCAGTCAGGGAAGTTTCCCTGGATGTAAGGAAGGTTCTCGAGGTCTTAATTGAGAAAATCAATACCAAAATTCAAGCTGGGAAAGATAGATATCAATATTTTCGTATTTTATCTCAAGTGGCTTATTTAGAAGACATGGTCAACAACTGGGCTTACTCATTGCTAAGTCTGGAGCAGGATTCCCATGAGCATACAACAAAGGTTACACCAGCAAGTGGTGGGTCTTTAAACCATCATCTCACTAGTGAAAATCACCAAACAGAAGGTGGGGACTGCCATTTGGCTGTTCCTCGAGATGGTCATGATTTGAAGACATTGGAGGAAAGTCATAACGGAATTCCTGCTGAAATGACTGGATATATTCCCTCTAATGACCAAAATGGTAATTTAGATATTGATTGTGATGATGGAAATGCTAGTTCTGAAGGATCTCTACAGAACCATTCTTTTTCTGATAAGCATATCAACAACTCTGCTGCTGCTGCTGCTGCTGCTATGGCTGCAAACCAACCACTTTATCCAGCTACAGGTCAGGAGAATGGAACACTATTAGTGCAACATGAATCTCTAACTGCTGGAAATAATGAAGAGGTGCATGGAGAACTAGGGATTTCAAACAACTCAAGCAAATCCATGGGCACTCAATCTGTGCTTCTTTCTGAAAATGGAGTTCACACAGGTTTTGAACCCGAGACACAGAATGTTGAGATGGGTAACTCTCCCGTCTCTCATCAGCCTCTTATTGTGTCGTCATCCTCACAAGACATTGGAGCAAAATCAAGTGATGTTAAATCTGATAAACATGACAATGCTACAGATAATAATGTCTCTTCAAGTAGTGGCAGTGTTCCTGCCGAATCCGGGGTTATTTGCTTGTATCAATGTTGCCCTGCATGTCTCCACAGTCTCCATCATTTGACAAAGAAAATGCTTGTTGGAGACTGGGGGTTGAACAGTGACCAGTGGACTGTAGAAGATGTCCATGATGCTGTTGCATCATTATCTGTGGATCTTATTTCAGCAGTTAGAAAAAGCTTTATGGCTGAAGATTTCATTGATTCATCAAATAAAACCTCAAGGCATGAAAACCATGGAACATCTCTTGATTGTTTGAACCCGAGAATGTGTAATGCTGAAGACCAAGGCAAGGATGTTGTGCCAGCTGAATGTGTTTCTCACTCTGCAAGCCAACAACATGCATCTGCAATTGAAGATACCCTACTGTATGAAGAATCAACACTGATTGATCTTAAATTTGTTTTCAGAGATGGTGTACTAGTTCATATGGACCCTGACAAGGATGTCTCTTTTCACTGTAAATTTGAGAACTTGTGCCTTTGTTCTCTTAGAGAGTTGATACTAATGACAAAGCGCCCGTTTGATTAG 5616 0.432 MRSSPSSLGSSSRSGLRLRKKHKRLDAICEDEYTRNHGELNEENDGLDPDAGVRRSSRVRRAPVLLDASPAPPKKRRRVGKGGIGRGVESPSSLGRENRGSGGAWTSRLRSRVVNVRFRVKEEKESPRGKRRLFGDVVEKRGDDEVDRKEELEGLMPKVVKSKRPGRIKATKHDEGHEDDLSHGSLEESKSQEVVLVSSSDEESDSESETELSEEEMMDESDGNAPSMVGNEDGDQMDDSDGNVPPMVENEERNLSHDLQMEECGDDIESSTQVEHEDKVDYQLEGAKESKSVGNAAEQVDNEGFVSKEVDDGENVLKDANVDKKIDDGENVLKDANVDKEVDANDNVLKDANTGRNDELKHASNDKRGHLRIKEGRRCGLCGGGTDGKPPKRLAQDNGESENEAYSGSSSSEETNYDIWDGFDDEPGWLGRLLGPINDHHGIARIWVHLHCAVWSPEVYFANFGCLKNVRAALFRGRALKCTRCGRRGATTGCRVDRCPRTYHLPCARASGCIFDHRKFLIACTDHRHLFQPRGNKYLARIKKLKARKIMWEIRKQSNEACRKDIGDEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSGSASENSFEGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPLRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSIDDRASILSLHTQKWPKPVTGSLLEWIARKTPGFAGADLQALCTQAAINALKRNFPLQEVLSLAAKEKHSGSKQLPLPSFAVEERDWIEAVFSSPLPCSRRDAGNAANDVVCSPLPIQLIPCLLQPLCTLLVSLYLDERLWLPLPISKAVTVIKDAMISALDKKQKPFDHWWLHMDDFLHESNTVYELKRKLTCSGILSADDGINSSNDCVDDANDNNLILESSTRNHLGMRSGLFALANKSGFRILISGNPRSGQRHLASCLLYCFIGNIEIQKIDMATILQEGHGEVVQGIAEILMKCASRQSCVVFLPRIDLWALEKHFQIAERTDSCLKIGKSCFTPNQVVEKESEISTEKNSTEMANGQAITKASFAWMSFIEQVESIGVSTSLMILATSEVPYKELPRKVREFFKSYQSKDGQSIPLEQTVPRFSVQIDENFDHDMVINLSALELLRNVVEQLVQLIHQRSHVGGQKGHKTYESIEVCKDKVCQRKEGSANDKKSEIQLESFTKVPPTPNSSKSLKGKSTLLLAISTLGYQILLYPHFSELCWVTSKLKRGPCADVSGPWRGWPFNSCIIRPSNSHDKVVVSCSSASIKSREASGLVRGLIAVGLSAYRGVYTSVREVSLDVRKVLEVLIEKINTKIQAGKDRYQYFRILSQVAYLEDMVNNWAYSLLSLEQDSHEHTTKVTPASGGSLNHHLTSENHQTEGGDCHLAVPRDGHDLKTLEESHNGIPAEMTGYIPSNDQNGNLDIDCDDGNASSEGSLQNHSFSDKHINNSAAAAAAAMAANQPLYPATGQENGTLLVQHESLTAGNNEEVHGELGISNNSSKSMGTQSVLLSENGVHTGFEPETQNVEMGNSPVSHQPLIVSSSSQDIGAKSSDVKSDKHDNATDNNVSSSSGSVPAESGVICLYQCCPACLHSLHHLTKKMLVGDWGLNSDQWTVEDVHDAVASLSVDLISAVRKSFMAEDFIDSSNKTSRHENHGTSLDCLNPRMCNAEDQGKDVVPAECVSHSASQQHASAIEDTLLYEESTLIDLKFVFRDGVLVHMDPDKDVSFHCKFENLCLCSLRELILMTKRPFD* 1872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 382 414 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 400 414 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 168 187 - -
Lapu5g01050 1871 PANTHER AAA DOMAIN-CONTAINING 13 1767 IPR045199 -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 344 369 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 288 312 - -
Lapu5g01050 1871 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 790 883 - -
Lapu5g01050 1871 Pfam ATPase family associated with various cellular activities (AAA) 654 789 IPR003959 GO:0005524|GO:0016887
Lapu5g01050 1871 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 616 846 IPR027417 -
Lapu5g01050 1871 FunFam ATPase family, AAA domain-containing 2 614 796 - -
Lapu5g01050 1871 ProSiteProfiles Extended PHD (ePHD) domain profile. 416 528 IPR034732 -
Lapu5g01050 1871 Pfam AAA+ lid domain 815 847 IPR041569 -
Lapu5g01050 1871 SMART AAA_5 650 791 IPR003593 GO:0016887
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 1 106 - -
Lapu5g01050 1871 ProSitePatterns AAA-protein family signature. 759 777 IPR003960 GO:0005524|GO:0016887
Lapu5g01050 1871 Pfam PHD-like zinc-binding domain 449 528 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 1638 1669 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 1533 1561 - -
Lapu5g01050 1871 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 374 530 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 121 160 - -
Lapu5g01050 1871 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 424 530 IPR013083 -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 200 221 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 23 61 - -
Lapu5g01050 1871 Gene3D - 790 856 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 121 254 - -
Lapu5g01050 1871 MobiDBLite consensus disorder prediction 1638 1693 - -
Lapu5g01050 1871 Gene3D - 615 789 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01050 Lapu-Chr5 21269492 21276980 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01050 616 851 Calmodulin-binding Proteins AT3G56690 40.756 3.10e-45 177