Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01037 ATGGCTGACGTGGCAGGTCTAGTTGAGGCAGCGGGATCGAGATTCACTTCATTGGAGCTTATTGGGCAGGGATCGTTTGGAGACGTCTATAAAGCGTTTGACAGGGAGCTCAACAGAGAAGTCGCCATCAAAGTAATTGACTTGGAAGAAGCAGAGGATGAAATTGATGATATCCAGAAGGAAATTTCTGTTTTGTCCCAGTGTCGATGTCCATACATTACTGAATATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGTTCAGTTGCTGATCTACTCCAAGCAGGTCATCCCCTTGATGAAATGTCAATTGCTTGCATTCTACGTGACTTGCTTCATGCTGTTGATTATCTACACAGCGAAGGGAAAATTCACAGAGACATTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGCGTTTCTGCACAGTTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACGCCATTTTGGATGGCTCCGGAGGTTATTCAGAATACTGATGGATATAATGAGAAGGCAGATATTTGGTCTTTGGGAATCACTGCTATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCAATGAGAGTGCTTTTCATCATACCCCGGGAGAGTCCTCCACAGCTAGATGATCATTTTTCCCGTCCAATGAAAGAATTTGTCTCATTGTGCTTAAAGAAGGTTCCTGCTGAGAGGTCAAGTGCGAAGGAACTTCTCAAGGACCGTTTTATTAGGAATGCTAGGAGGAGTTCAAAGCTTGTAGAAAGAATAAGGGAACGTCCAAAATACCAAATAAAGGAAGAAGATCAGGAAACACCTAGAAATGTCTCAAGAGGGATGGGGGAGGCATCAGATACTGTAAAAGTGGCTAGAGATGCAAGAGGTGAAGAAAATAATCGACCCAGTGATCAGGTTAAAACCCTGAAAAGTGGTGGATGGGACTTCAATATCGGGGGATCACAGGCTACTGGAACCATTCGTAATGTTTCTCGACCACCGCAGTTTAGAGAGAAGAAAGGTGAAGGTTCATCTAATCAACTAACCCAAAGAAAAGCTCCAGAGAGTGGTTATCAAGGGGGATCTGCCAATAGAAGTGCACTTAATGAGTCACTTGAAAGTTCCTTTGGAAGAGATCTTAGAGTTCCCCACCATGATGAGCAGCTTGACAATAACATTGAAGATGATGAATTATCTGGAAACGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGGTCAAGGTCATCTGTATTCGGTGACCAGAGCTCTCAATATAGTAGCAGCTATTCTTCTTTTGAAGATGCTTCTACAAGTGGGACTGTTGTTTTACGTGGCCAGCATGATGAGCCTGATTCTCCACAGCCACTAAGATCTCGACTGGGACTTAACGACAGAAATTCAAATTCCTCAATGGAAGACAGCGCGATAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGAGGACTCAGGAAAGTGAGTTCTAGAGAAAGATTGGCCTGGGGAAAAATCAACAATGAAAGACAGGAAGGCAAGAAGGATGGAAAAGCTAGCAGCTCTGACTCTTCAAGACTACGTGGCGAACATGATGCACACAAGGGCGTGTCAGGATCACATCATGCTAGTAATGATGAAGGAAGTGCTAAAATAATGTCATCCTCGGTGTCATTATCTGCTTTACTTGTTCCAGCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGGTCAGTTGTGCGGGCAGTTATCAATTCTTTTATAAACATGGAGGGCACAAAACCTAAATCCTGTGATGCTCTTCTCAAACAGTTGCTTCTGAGATTGGCAAGTTCAAAGGAAGATTCACTGAAGGACCTGCAGGGACTAGCAGGCCAGCTATTCAGCAAAGTAACCCAAAATGCAGAGGCTGATAACAGGAAAAAACAACAAAACAAGGAACATCATCCTCATAGCAATTTAAGTCCACTAGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAACCTCACGGGATCTAAACTCATCGAGTTAG 2094 0.4312 MADVAGLVEAAGSRFTSLELIGQGSFGDVYKAFDRELNREVAIKVIDLEEAEDEIDDIQKEISVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQAGHPLDEMSIACILRDLLHAVDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRESPPQLDDHFSRPMKEFVSLCLKKVPAERSSAKELLKDRFIRNARRSSKLVERIRERPKYQIKEEDQETPRNVSRGMGEASDTVKVARDARGEENNRPSDQVKTLKSGGWDFNIGGSQATGTIRNVSRPPQFREKKGEGSSNQLTQRKAPESGYQGGSANRSALNESLESSFGRDLRVPHHDEQLDNNIEDDELSGNGSGTVVIRSPKGSRSSVFGDQSSQYSSSYSSFEDASTSGTVVLRGQHDEPDSPQPLRSRLGLNDRNSNSSMEDSAINLAEAKAAIQGGLRKVSSRERLAWGKINNERQEGKKDGKASSSDSSRLRGEHDAHKGVSGSHHASNDEGSAKIMSSSVSLSALLVPALKEAIADDPEGSVVRAVINSFINMEGTKPKSCDALLKQLLLRLASSKEDSLKDLQGLAGQLFSKVTQNAEADNRKKQQNKEHHPHSNLSPLARFLLSRWQGQTSRDLNSSS* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01037 697 SUPERFAMILY Protein kinase-like (PK-like) 12 289 IPR011009 -
Lapu5g01037 697 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lapu5g01037 697 MobiDBLite consensus disorder prediction 362 395 - -
Lapu5g01037 697 MobiDBLite consensus disorder prediction 654 674 - -
Lapu5g01037 697 MobiDBLite consensus disorder prediction 399 413 - -
Lapu5g01037 697 MobiDBLite consensus disorder prediction 287 494 - -
Lapu5g01037 697 MobiDBLite consensus disorder prediction 523 561 - -
Lapu5g01037 697 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01037 697 MobiDBLite consensus disorder prediction 523 571 - -
Lapu5g01037 697 MobiDBLite consensus disorder prediction 308 326 - -
Lapu5g01037 697 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
Lapu5g01037 697 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 650 - -
Lapu5g01037 697 FunFam serine/threonine-protein kinase dst1 isoform X1 12 301 - -
Lapu5g01037 697 Coils Coil 41 68 - -
Lapu5g01037 697 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g01037 697 MobiDBLite consensus disorder prediction 655 673 - -
Lapu5g01037 697 CDD STKc_MST3_like 13 287 - -
Lapu5g01037 697 MobiDBLite consensus disorder prediction 417 466 - -
Lapu5g01037 697 MobiDBLite consensus disorder prediction 337 353 - -
Lapu5g01037 697 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01037 Lapu-Chr5 20895774 20910457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01037 1 693 MAP Kinase Kinase Kinase Kinase AT3G15220 63.506 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lapu5g01037 Pkinase 5.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01037 K08838 - gmx:100814188 1136.71