Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01036 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAAAAGAGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATTCGTCCTCGCCCGAGAGTTCGAGGTGGTAATGGCTGCAAGGTTGGAGATGACAACGGTAGCTTGATGTTGATGTGGGAAGATGGTTTCTGCCGAGGAAGTATTGATGGAGAGGATCCTGTGAGAAAGGCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGGAAAGTTGCATCTGATAAGTGCCACAAGTGGGTCTTTAAAGAGCCCACAGAATGTGAACCGAATATCTCCAACTATTGGCAGAGTTCCTTTGATGCTCTTCCTCCTGAGTGGACAGACCAGTTTGAGTCAGGCATTCAGACCATAGCTGTAATTCAAGCTGGGCATGGCCTTCTCCAACTTGGTTCTTGCAAGATTATTCCTGAAGACCTTCATTTTGTGCTTAGAATGAGACACACTTTTGAATCCCTTGGCTACCAATCTGGTTTCTACCTCTCCCAACTCTTCTCTTCAACAAGGAACACTTCCTCTTCTACTTCTGTTCCTTCAAAACCATCCACCATTCCAATTAGGCCACCCCCACTCTTCAACTGGGGTCAGAGGCCACTTACTTCTGCCACCTCCATGTTGTCGTCACCCAATTTTCAACAACATGCAGCTAGACTTGGGTTCCCTAAAGATGAGGCAAACATGTTTCTCATTCCTCATGCATCAGCTGAGAGTGCAAGAATCGAGGACATGATGGGGGAGCATGAAAACGACATAAAATGGCCCAATGGCTTGTCTTTCTTCAATGCTCTCACTGGAAGAACAGATGATGCAAAGCTTTTGTTCAATCCTGATACCTTGGGGAGCAAACCAGGTGACCAAAGTCAGCATCACCCTCTGAGTCAAAATCCCAATTCTGATGCCTCCAATATGCAAAATGCTAGTGCAACCAACCCAAATGAGTTCTTGAGCTTGGATAACAACCAAGATGATGCAAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTCTTCCTGCAAGAGTAGCCTCATCATCTTCATCCACTTCAATGGATCACCATCATCAACAAGGTGTGCAGTATAGGAATTCAGAAGGAGGTATGTACCCGGATGTCATGGAAACCTTTTTGGAGTGA 1221 0.4603 MVGSGASDRSKEAVGMMALHEALKRVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGSIDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSVPSKPSTIPIRPPPLFNWGQRPLTSATSMLSSPNFQQHAARLGFPKDEANMFLIPHASAESARIEDMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPDTLGSKPGDQSQHHPLSQNPNSDASNMQNASATNPNEFLSLDNNQDDARKMDKFKRSFTLPARVASSSSSTSMDHHHQQGVQYRNSEGGMYPDVMETFLE* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01036 406 MobiDBLite consensus disorder prediction 310 348 - -
Lapu5g01036 406 MobiDBLite consensus disorder prediction 368 395 - -
Lapu5g01036 406 PANTHER GB|AAF34833.1 1 406 IPR044170 -
Lapu5g01036 406 MobiDBLite consensus disorder prediction 304 349 - -
Lapu5g01036 406 MobiDBLite consensus disorder prediction 368 391 - -
Lapu5g01036 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 75 IPR025610 -
Lapu5g01036 406 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 82 180 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01036 Lapu-Chr5 20841733 20844340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01036 20 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.728 1.63e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01036 - - gmx:100814723 749.969