Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01034 ATGCATCTTTTTTACCATAGGACTATATATGGCAAGGTAAAAGTTGGTTTGGGTTCATCAGACCCTGATTCAGGGAAAGGCAAGAGCAAGATGTCGAAGAACATAACTCATGGCTTTCACTTGGTAAAAGGAAAATCATATCATGACATGGAGGATTATGTGGTTGCTCAATTTAAGCAAGTAGATAGCAATGAATTGGGTTTGTTTGCAATATTCGATGGCCACGCAGGTCACAATGTCCCTAATTATCTGCAGTCTCATTTGTTTGATAATATCTTAAAAGAGCCTGATTTCTGGAAAGAACCTGCAGATGCTGTCAAGAGAGGTTACAGTAAAACTGATTCTAATATTTTAGAGATGTCGGGTGAATTAGGTAGAGGGGGTTCAACTGCAGTTACAGCCATATTAGTCAATTGTCAGAAGTTAATAGTAGCCAACATTGGGGATTCCCGGGCCGTCTTATGCAAGAAGGGTGTGGCCAAACAATTATCAGTGGATCATGAGCCAAACACGGAACATGAGGATATAAAAAATAGAGGTGGTTTTGTATCAAACTTTCCAGGGGATGTTCCACGGGTTGATGGACGGCTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAACACTTGAGTTCAGAGCCATTTGTGACAGTGGAGAATATAGATGATGATGCAGAGTTCATTATATTAGCCAGTGATGGATTATGGAAGGTAATGTCAAATCAAGATGCAGTTAATTGCATCAGAAATACAAAGGATGCTCGGTCTTCAGCAAAGCGCCTTACCGAAGAAGCAGTTAACAGGAAAAGCACCGATGATATCTCGTGCATTGTTGTCAAATTGCAGTGA 855 0.4094 MHLFYHRTIYGKVKVGLGSSDPDSGKGKSKMSKNITHGFHLVKGKSYHDMEDYVVAQFKQVDSNELGLFAIFDGHAGHNVPNYLQSHLFDNILKEPDFWKEPADAVKRGYSKTDSNILEMSGELGRGGSTAVTAILVNCQKLIVANIGDSRAVLCKKGVAKQLSVDHEPNTEHEDIKNRGGFVSNFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPFVTVENIDDDAEFIILASDGLWKVMSNQDAVNCIRNTKDARSSAKRLTEEAVNRKSTDDISCIVVKLQ* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01034 284 ProSiteProfiles PPM-type phosphatase domain profile. 36 283 IPR001932 -
Lapu5g01034 284 FunFam Probable protein phosphatase 2C 39 26 284 - -
Lapu5g01034 284 Pfam Protein phosphatase 2C 49 276 IPR001932 -
Lapu5g01034 284 CDD PP2Cc 37 283 IPR001932 -
Lapu5g01034 284 SMART PP2C_4 26 281 IPR001932 -
Lapu5g01034 284 ProSitePatterns PPM-type phosphatase domain signature. 68 76 IPR000222 GO:0043169
Lapu5g01034 284 Gene3D - 19 284 IPR036457 -
Lapu5g01034 284 PANTHER PROTEIN PHOSPHATASE 31 282 IPR015655 GO:0004722|GO:0006470
Lapu5g01034 284 SUPERFAMILY PP2C-like 32 283 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01034 Lapu-Chr5 20807363 20810728 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01034 12 284 PP2C-type Phosphatase Gene Family AT3G15260 73.818 7.01e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01034 K17506 - gmx:100500617 511.146