Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g01026 ATGGAACTCCAGATACGTGTTTTTTGTCTGTTCTTGTTTCTCTTGAGTCTCCTCTCCAGGTCTCAGGCCTACACCTTCTACGTTGGTGGAAAAGATGGTTGGATTTTGTACCCTTCTGAGAATTACAATCACTGGGCTGAAAGGATGAGGTTCCAAGTCAGTGACACTCTTGTTTTCAAGTACAAGAAGGGATCGGACTCGGTTTTGGTGGTGAACAAGGAGGATTATGAGAAATGTAACAAGAAGAACCCCATCAAGAAGTTTGAGGATGGTGAGTCGGAGTTTCAGTTTGATCGGTCTGGTCCTTTTTACTTCATCAGTGGAAATAATTGTGAGAAGGGTCAGAAACTTATTATTGTGGTGCTGGCTGTGAGAGAGCCTCCTCCATATTCTCCAACACCTCCAAACACTCCCTATGTTCCTCCTACTCCTCCAAACACTCCCTATGTTCCTCCTACTCCTCCAAATACTCCTCCAAAAGCACCTTCACCTTCTCATCATCCACCCTATCTTCCAACACCTCCCAAAACACCCTCTCCTGTTTACCCTCCACCAAATGTTCCCCTTCCTCCACAAGCTCCTTCCCCAGGTAACCATCCACATCCTCCCTATCCTCCAACACCTCCCAAAACTCCTTCACCCACTTATACTCCTCCTAATGTTCCCTATCCTGCAAAAGCTCCTTCCCCTAATAACCATCCACCCTATGCTCCTCCTAATGTTCCCACTCCTCCAACCACACCTTCTCCCACCTATGCTCCTTCCCCTAATAATCATCCACCCCATGTTCCTATACCTCCACAGACACCTTCTCCAACTTATAGTCCTCCAAAAACTCCTTCCCCTGGTCACCAACCTCATGTCCCAATTCCTCCAACCACTCCCTCTCCTATTTCCCAACCTCCTTATACTCCAAACCCTCCACAAACCCCTTCCCCTAATCATCAGCCACCCTTTGTTCCAATAACCCCATCACCATTTTCTCAACCACCTTATGTGCCAACACCACAAACTCCTTCTCCTACTTCCCAACCTCCTTACATTCCACCACCTCCAAACACTTCTTCCCCAACATCTCAGCCACCTTACATTTCCACACCACCATCCACCACTCCTTCTCCCGTTTCCCAACCTCCCTACACTCCTTCCCCAACATCTCAACCACCCTACCCTTATGCCCCAACTCCAAAACCCAATTCCCCTGTCACCCAACCTCCATCATTATCCCCATCACCACTCTCACCAATATCACCGTATCCATCCACCATCCCTCCATCATACCCACCTTCCCCCTATGCTCCGGCTACAACACCACTTCCATCCACCACGTCTCCACCGCTGCCATCTCCGGCAACCGCCACTTCTCCAACGGCATCACTCCCGGCAGCAACAAGCCCATCGCCATCGTCTTCGCCGGGATCGTCGTCGAACGAAACGACGCCGTCCCGGCCGAACGGCGCATCGTCTGTAGCGGCGTCGCGTTTAGGAGTGTACTCACTAACCATTGTGGTCGGCGCTGCTCTTAGTACCATTCTTGGTTAG 1542 0.5026 MELQIRVFCLFLFLLSLLSRSQAYTFYVGGKDGWILYPSENYNHWAERMRFQVSDTLVFKYKKGSDSVLVVNKEDYEKCNKKNPIKKFEDGESEFQFDRSGPFYFISGNNCEKGQKLIIVVLAVREPPPYSPTPPNTPYVPPTPPNTPYVPPTPPNTPPKAPSPSHHPPYLPTPPKTPSPVYPPPNVPLPPQAPSPGNHPHPPYPPTPPKTPSPTYTPPNVPYPAKAPSPNNHPPYAPPNVPTPPTTPSPTYAPSPNNHPPHVPIPPQTPSPTYSPPKTPSPGHQPHVPIPPTTPSPISQPPYTPNPPQTPSPNHQPPFVPITPSPFSQPPYVPTPQTPSPTSQPPYIPPPPNTSSPTSQPPYISTPPSTTPSPVSQPPYTPSPTSQPPYPYAPTPKPNSPVTQPPSLSPSPLSPISPYPSTIPPSYPPSPYAPATTPLPSTTSPPLPSPATATSPTASLPAATSPSPSSSPGSSSNETTPSRPNGASSVAASRLGVYSLTIVVGAALSTILG* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g01026 513 CDD OsENODL1_like 24 122 IPR041846 -
Lapu5g01026 513 MobiDBLite consensus disorder prediction 130 492 - -
Lapu5g01026 513 FunFam Early nodulin-like protein 1 23 126 - -
Lapu5g01026 513 Gene3D - 22 125 IPR008972 -
Lapu5g01026 513 MobiDBLite consensus disorder prediction 453 492 - -
Lapu5g01026 513 PANTHER BLUE COPPER PROTEIN 24 198 IPR039391 GO:0009055
Lapu5g01026 513 MobiDBLite consensus disorder prediction 130 452 - -
Lapu5g01026 513 Pfam Plastocyanin-like domain 36 115 IPR003245 GO:0009055
Lapu5g01026 513 ProSiteProfiles Phytocyanin domain profile. 24 123 IPR003245 GO:0009055
Lapu5g01026 513 SUPERFAMILY Cupredoxins 23 122 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g01026 Lapu-Chr5 20632965 20635114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g01026 8 127 Phytocyanin Superfamily AT4G27520 55.738 5.37e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g01026 - - var:108333029 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g01026 5 20632965 20635114 Lapu5g01026 5 20632965 20635114 ECH