Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00981 ATGGAAGATGAACATATAAGGATAGATGATTTGTCATCTCATATGGTATCACTATACAACTTTCCCAAGCCAAGTGCCTTTTATGGGGTGTTTGACGGGCATGGAGGACCTGAAGCTGCAGCTTATATAAGAAAAAACGTGATAAAATTCTTCTTCGAAGATGTCAGTTTCCCACAGACTTCTGAAGTCAATAATGTATTTCTGGAAGAGGTAGAGGATTCCCTCAGAAAGGCATTTCTTTTGGCTGATTCAGCTTTGGCCGATGATTGCAGTGTGAATAGTTCATCAGGCACCACGGCCCTTACTGCTTTGATATTTGGAAGGTAG 327 0.4128 MEDEHIRIDDLSSHMVSLYNFPKPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVNNVFLEEVEDSLRKAFLLADSALADDCSVNSSSGTTALTALIFGR* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00981 108 ProSiteProfiles PPM-type phosphatase domain profile. 1 108 IPR001932 -
Lapu5g00981 108 PANTHER PROTEIN PHOSPHATASE 2C 1 105 IPR015655 GO:0004722|GO:0006470
Lapu5g00981 108 Gene3D - 1 108 IPR036457 -
Lapu5g00981 108 SUPERFAMILY PP2C-like 9 107 IPR036457 -
Lapu5g00981 108 ProSitePatterns PPM-type phosphatase domain signature. 27 35 IPR000222 GO:0043169
Lapu5g00981 108 Pfam Protein phosphatase 2C 1 107 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00981 Lapu-Chr5 19192599 19197369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00981 1 108 PP2C-type Phosphatase Gene Family AT3G62260 75.000 2.82e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00981 K14803 - gmx:100819791 206.068