Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00980 ATGATGGGATTGGACGATGATTTGGCCGGGGAGATGCATAGCGTGTTCCTCTGCGTTCTGCCGATGTTTCATGTGTTTGGTTTGACGGTGATTTCGTACGCCCAGCTTCAGAGGGGCAGTGCTGTGGTGTCTCTGACGAAGTTTGAGTTTGAACTGGTTTTGAAGACGATTGAGAAGTATAGGGTGACTCATTTGTGGGTTGTGCCTCCGATTATTCTTGCTTTGGCTAAACATGGTTTGGTCGATAAGTATGATCTTTCCTCGCTGAAGCATATTGGTTCTGGTGCTGCTCCTCTTGGGAAATAG 306 0.4739 MMGLDDDLAGEMHSVFLCVLPMFHVFGLTVISYAQLQRGSAVVSLTKFEFELVLKTIEKYRVTHLWVVPPIILALAKHGLVDKYDLSSLKHIGSGAAPLGK* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00980 101 Gene3D - 2 101 - -
Lapu5g00980 101 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 101 - -
Lapu5g00980 101 Pfam AMP-binding enzyme 11 100 IPR000873 -
Lapu5g00980 101 SUPERFAMILY Acetyl-CoA synthetase-like 13 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00980 Lapu-Chr5 19192599 19197369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00980 1 101 Monolignol Biosynthesis Gene Families AT4G05160 72.277 2.73e-49 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00980 K01904 - gmx:100797843 187.578