Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00971 ATTTCCGTTTTTTTTTTCTTTTTCCTTTCACTGCTTCGACGTGCACACACGGTGAATTCACTCCTCTCTCTTTCTCTCTCGTTTTTCCCTTCACTGCTTCGACGTGCACGCACATTTGCAGGTGAATTCGGGTATGGCTCCGACGGAATATTCAGATCTCTCAGACCTTCAATCGTTTTCCCCAAACAACCCAACCTCTCACTCGTTTCCCACCTCTTCAACAGAGTCGCACCGTTTCCCTCCAAACACGCCCTTATCGATGCCGATTCTTCCCAAACCCTTTCATTTGCGCAGTTGAAGTCCCTCACCGTTAAAGTCTCGCACGGCCTCCTCCGTCTCGGCGTCGCCAAAAACGACGTCGTTCTCTTCCTCACCCCCAACGATATCCGCTACATCGTCTGCTTCCTCGCCGTCACTTCCCTCGGCGCCGCCGTCACTACCGTCAATCCCACCTACACCGCCGCCGAGGTCGCCAAACAGGCCAAAGACTCCAATCCCAAACTTGTCGTCACTGTCCCCGAACTGTGGGACAAGCTCCAACACCTCAACCTTCCCGCGGTGTTCCTACACTCCCATGCGCCCTCCCACGCGACTAGCTTTGACGCGCTCGTCCAACTCGCAGGGTCGCCGACCGAGTTTCCGAAGGTTGACGTCAAGCAGAGTGACACGGCGGCGCTGCTGTACTCCTCCGGGACCACGGGACTGAGCAAGGGCGTGGTTCTCACGCACGGGAACTTCGTGGCGGCATCGTTGATGATGGGATTGGACGATGATTTGGCCGGGGAGATGCATAGCGTGTTCCTCTGCGTTCTGCCCATGTTTCATGTGTTTGGTTTGACGGTGATTTCGTACGCCCAGCTTCAGAGGGGCAGTGCTGTGGTGTCTCTGACGAAGTTTGAGTTTGAACTGGTTTTGAGGACGATTGAGAAGTATAGGGTGACTCATTTATGGGTTGTGCCTCCGATTATTCTTGCTTTGGCTAAACATGGTTTGGTCGATAAGTATGATCTTTCCTCGCTGAAGCATATTGGTTCTGGTGCTGCTCCTCTTGGGAAAGAGTTGATGGAGGAGTGTGCTAAAAGTTTCCCTCGTGCCACTGTTTCTTAG 1107 0.5339 ISVFFFFFLSLLRRAHTVNSLLSLSLSFFPSLLRRARTFAGEFGYGSDGIFRSLRPSIVFPKQPNLSLVSHLFNRVAPFPSKHALIDADSSQTLSFAQLKSLTVKVSHGLLRLGVAKNDVVLFLTPNDIRYIVCFLAVTSLGAAVTTVNPTYTAAEVAKQAKDSNPKLVVTVPELWDKLQHLNLPAVFLHSHAPSHATSFDALVQLAGSPTEFPKVDVKQSDTAALLYSSGTTGLSKGVVLTHGNFVAASLMMGLDDDLAGEMHSVFLCVLPMFHVFGLTVISYAQLQRGSAVVSLTKFEFELVLRTIEKYRVTHLWVVPPIILALAKHGLVDKYDLSSLKHIGSGAAPLGKELMEECAKSFPRATVS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00971 368 ProSitePatterns Putative AMP-binding domain signature. 226 237 IPR020845 -
Lapu5g00971 368 Gene3D - 48 368 IPR042099 -
Lapu5g00971 368 Pfam AMP-binding enzyme 74 364 IPR000873 -
Lapu5g00971 368 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 48 364 - -
Lapu5g00971 368 SUPERFAMILY Acetyl-CoA synthetase-like 57 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00971 Lapu-Chr5 18463910 18467980 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00971 44 363 Monolignol Biosynthesis Gene Families AT4G05160 59.451 5.16e-143 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00971 K01904 - gmx:100797843 550.821