Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00929 ATGTTTGATGACGTCGTCTACAAAATTAAGACAAAGAAAGGTGGATTTCTTGGGAAGAACAGAGAGACTGTTGTAAAAGAGATACTGAAGGGAGTGACAGGTGTTGTTGAACCTGGTGAAATGCTGGCCATGTTAGGTCCATCTGGGAGTGGCAAAACAACTCTGCTCACAGCATTGGGAGGCAGGCTTGGAGGGAAGCTTCAAGGAAGCATAACTTACAATGGTGAAGCCTTCTCAAATGCCATGAAGAGAAACACTGGCTTTGTTACCCAAGATGATGTTCTCTACCCCCACTTGACTGTGCTTGAGACCCTGGTGTTCACTGCACTTCTCAGATTGCCCAGCAGTGTCACCAAGGAAAAGAAAATTGAGCATGCAAAAGGTGTGATAGATCAACTTGGTTTAACCAAGTGCAAGGATAGCATAGTTGGAAGCCCTTACTTGAGGGGGGTTTCTGGGGGAGAGAGAAAGAGGGTTAGCATAGGACAAGAACTACTCATAAACCCAAGCTTGTTGTTTCTTGATGAACCAACTTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACCTTGTGGGAGCTAGCATGTGGGGGGAGAACTGTTGTGATGACAATACACCAACCTTCAAGTAGACTATATTACATGTTTCATAAGGTGTTATTGCTATCTGAAGGGAACACATTGTATTTTGGAAAGGGATCTGAAGCCATTGAATATTTTTCTAATATTGGATATGCTCCATCATTGGCCATGAACCCCTCAGATTTCCTTTTGGATCTTGCAAACGGTACCTACACTGATGAATTTAATTCGGATCATACTATAGATAAACAGAAATTGATTTCGGTATGTAAGAGAAACTTTGTTGCACAATCGAAGCCAGCACTTAAAGGAATCAATGACTCTGGCAAACACCAGAATAGATTTCAAGAAAAGGGCTCTGAAAAATGGCCTACCAATTGGACACAGCAATTCCTTGTACTATTAAGAAGAGACATCAAAGAGAGAAGGCATGAATCATTCTCTGTTTTGCGAGTTTGTCAGATCCTTGTGGTTGCTCTTATTTCAGGACTACTCTGGTATAAGTCTGATATCTCACATTTGCAGGATCAGATTGGGCTTCTATTCTTCATATCTGGCTTTTGGGGGTTTTTCCCTCTCTTTCAAGCAATTTTCACCTTTCCTCAAGAGCTAATGATGCTACAAAAAGAAAGATCTTCTGGAATGTACAGGCTTTCCTCATATTTCATGTCAAGGGTGGTGGCTGACCTTCCCATGGAACTTGTTCTTCCGACCATATTCCTTTGCATAACCTATTGGATGGCAGGGTTGAAGGCCAACGTGGTGAACTTCATGTGCACATTGCTCTCTCTCTTGCTCAATGTGTTAGTAGCACAAGGCCTTGGCCTTGCCCTTGGTGCTTCAGTAATGGATCAAAAAGCTGCAACCACACTTGCCTCAGTGATCATGCTATGCTTTTTGCTGGCTGGTGGATTTTATGTTCAGCATGTTCCAAAGTTTATAGCGTGGATTAAGTACATTTCTATCAGCTACTACACCTACCAGCTCTTCATTGGGTCTCAATATAGCTATGGTGAGACATACCCTTGTTTGAATGGCCAGTGCCAAATTGTGGAGTTTCCTTCTATAAAGCAAATAGGGGTTCATTTTGGATTGCATGACCAACTCTTGGCTGCTTTAGGTCTAGTCATAATGCTCATAGTTTACAGACTTATAGCCTATCTTGCTCTTATGAGGATTGGAGTGACAAAGAACTAG 1785 0.423 MFDDVVYKIKTKKGGFLGKNRETVVKEILKGVTGVVEPGEMLAMLGPSGSGKTTLLTALGGRLGGKLQGSITYNGEAFSNAMKRNTGFVTQDDVLYPHLTVLETLVFTALLRLPSSVTKEKKIEHAKGVIDQLGLTKCKDSIVGSPYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELACGGRTVVMTIHQPSSRLYYMFHKVLLLSEGNTLYFGKGSEAIEYFSNIGYAPSLAMNPSDFLLDLANGTYTDEFNSDHTIDKQKLISVCKRNFVAQSKPALKGINDSGKHQNRFQEKGSEKWPTNWTQQFLVLLRRDIKERRHESFSVLRVCQILVVALISGLLWYKSDISHLQDQIGLLFFISGFWGFFPLFQAIFTFPQELMMLQKERSSGMYRLSSYFMSRVVADLPMELVLPTIFLCITYWMAGLKANVVNFMCTLLSLLLNVLVAQGLGLALGASVMDQKAATTLASVIMLCFLLAGGFYVQHVPKFIAWIKYISISYYTYQLFIGSQYSYGETYPCLNGQCQIVEFPSIKQIGVHFGLHDQLLAALGLVIMLIVYRLIAYLALMRIGVTKN* 595
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00929 594 FunFam ABC transporter G family member 22 17 245 - -
Lapu5g00929 594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 245 IPR027417 -
Lapu5g00929 594 ProSitePatterns ABC transporters family signature. 151 165 IPR017871 GO:0005524|GO:0016887
Lapu5g00929 594 Pfam ABC-2 type transporter 208 278 IPR043926 GO:0140359
Lapu5g00929 594 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 583 - -
Lapu5g00929 594 Gene3D - 17 245 IPR027417 -
Lapu5g00929 594 CDD ABCG_EPDR 16 233 - -
Lapu5g00929 594 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 9 251 IPR003439 GO:0005524
Lapu5g00929 594 Pfam ABC transporter 29 179 IPR003439 GO:0005524
Lapu5g00929 594 Pfam ABC-2 type transporter 325 531 IPR013525 GO:0016020|GO:0140359
Lapu5g00929 594 SMART AAA_5 38 228 IPR003593 GO:0016887
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu5g00929 Lapu-Chr5 15796770 15799599 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00929 2 265 Calmodulin-binding Proteins AT2G36910 26.471 5.12e-12 67.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00929 K05681 - gmx:100816135 978.008