Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00925 ATGGTGATGATGAAACTTGTAAAGTGGGTTTCCTTTGTTTTTGTTGTTTATTTGTTTTTGGTGAATGGTTCATTTGCTACATTCACTCCACGTGATAATTATCTAATTACTTGTGGTTCCTCCCAAAGTATCACTTTCCAAGATCGCACTTTCGTCCCTGATTCACAGCATTCTTCACCGCAGTTGAAAACCTCGAATTCTGTTGTCGTTAGTTCAAATTCCAGTGTCCCTTTCCCAATATATCAATCAGCTAGGATTTTCACTGAGAAAGCTTCTTATAGGTTTAAGGTTGAAGAAGGTAGGCACTGGCTCAGGCTATATTTTTCCCCTCTTACCAACTCAGCCCATAATTTGACTGCTGCTGTTATAACAGTGGTCACTGATGATTTTGTTCTCTTGTGCAACTTCTCCTTTAGGAACTACAATGGTTCATATATGTTTAGGGAGTATGGCATTAATGTTACCTCTGATACCTTAACTGTCACCTTCATTCCTTCAAATGGTTCAGCGGTAGCCTTTGTCAATGCAATTGAAGTTGTTTCAATGCCAAATGACTTGTTTGTTGATCAGGCATTGGCCCTCAACCCAACTGCACCATTCAATGGCCTTTCCGAACTTGCTTTTGAGACTGTTTATCGCTTAAACGTAGGAGGTCCCTTGCTCACTCCCCAGAATGACACCCTGGGAAGGACTTGGGAGAATGATCAGAAATACCTCCATGTGAATAGTTCAGTCACTAATGTTTCTGTTAACCCTTCCAGCATTAAGTATCATCCAGGTGTCACAACTGAGACGGCACCGAATTGGGTCTATGCCACTTCTGAAGCAATGGGGGATGCAAATGTAGCCAATTCAAATTTCAACATTACTTGGGTCTTTCCTGTGGATCCAAACTTCTCCTATTTCATCCGGGTGCACTTATGTGATATTATTAGCAAGTCTCTCAACACTTTAGTGTTCAATTTGTTCATAAATACTGACATAGCTCTTGGAAGCCTCGACCTCTCATCCTTAACCAATGATTTGTATGTGCCTTACTATAAGGACTTTGTTTCCAATGCCTCAGCAGACTCCAACATTTTGACAGTAAGTGTTGGTCCTGATACAATGGCAGATATTACAAATGCCACTATGAATGGACTGGAGGTTATAAAGATCAGCAATGCATTCAAGAGCTTGGATGGACTTTCTTCAGTTGAGAGTCTCCTTCCCAGTTCATCGTCAAGTAAAAGCAAGATGGGAATAATAGTAGGTTCTTCTATTGGAGCTGTGGCTGCCATAGCTTTGGTTGGTTTGTGTTATTGCTGCTTGGTGAGATACAGATCAAAGTCTACTCAACAGGGTCATTCTTGGTTGCCTTTACCCTTATATGGAAACTCTCAGACCATGACAAAAATGTCAACAACTTCTCAGAAGAGTGCAACTGCAAGCTGCATTTCTTTAGCTTCATCAAATCTCGGACGGTTCTTCACTTTCCAAGAGATCCTAGATGCAACCAACAAGTTTGATGAGAAGCTGCTTCTTGGCGTTGGTGGCTTTGGCAGGGTTTATAAAGGAACACTTGAAGACGGGACCAATGTAGCTGTCAAAAGGGGGAACCCCAGATCCGAGCAAGGTCTTGCTGAATTCCGAACAGAAATTGAGATGTTATCCAAGCTTCGCCATCGTCATCTTGTGTCCCTCATCGGCTATTGTGATGAGAGATCTGAAATGGTTCTTGTCTATGAATATATGGCTAATGGACCTCTGAGGAGTCATTTATATGGAACTGACCTACCACCTCTATCATGGAAGCAACGGCTTGAAATTTGCATTGGAGCAGCAAGAGGTCTTCATTATCTCCACACTGGCGCATCTCAAAGCATAATTCATCGCGATGTAAAGACAACTAACATCCTCTTAGATGATAACTTTGTTGCTAAGGTTGCTGACTTTGGCCTCTCCAAAACTGGTCCTGCTCTTGATCAGACTCATGTGAGCACTGCTGTTAAAGGTAGTTTCGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACAGAGAAATCAGATGTGTATTCATTTGGGGTGGTTTTGATGGAAGTGTTATGCACAAGACCAGCCTTGAACCCTGTCCTTCCTAGGGAGCAGGTTAACATAGCTGAGTGGGCAATGAGCTGGCAGAAGAAAGGAATGCTTGATCAAATCATGGATCAGAATCTTGTGGGGAAAGTAAATCCTGCTTCTCTGAAGAAGTTTGGGGAAACAGCCGAGAAGTGCTTGGCCGAGTATGGAGTGGATAGACCTTCTATGGGCGATGTCTTGTGGAATCTTGAATATTCTTTGCAGCTTCAAGAGACCTCATCAGCACTCATGGAGCCTGAAGATAACAGCACAAACCACATTACTGGAATTCAGTTGACTCGTCTTGAGCCTTTTGATAACAGTGTTAGTATGATTGATGGGGGCAACTCTTTCACAGATGATGATGCAGAAGATGCTGCCACAAGTGCAGTGTTCTCACAATTGGTAAATCCTCGCGGAAGATGA 2532 0.4254 MVMMKLVKWVSFVFVVYLFLVNGSFATFTPRDNYLITCGSSQSITFQDRTFVPDSQHSSPQLKTSNSVVVSSNSSVPFPIYQSARIFTEKASYRFKVEEGRHWLRLYFSPLTNSAHNLTAAVITVVTDDFVLLCNFSFRNYNGSYMFREYGINVTSDTLTVTFIPSNGSAVAFVNAIEVVSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNVGGPLLTPQNDTLGRTWENDQKYLHVNSSVTNVSVNPSSIKYHPGVTTETAPNWVYATSEAMGDANVANSNFNITWVFPVDPNFSYFIRVHLCDIISKSLNTLVFNLFINTDIALGSLDLSSLTNDLYVPYYKDFVSNASADSNILTVSVGPDTMADITNATMNGLEVIKISNAFKSLDGLSSVESLLPSSSSSKSKMGIIVGSSIGAVAAIALVGLCYCCLVRYRSKSTQQGHSWLPLPLYGNSQTMTKMSTTSQKSATASCISLASSNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMVLVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMSWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYSLQLQETSSALMEPEDNSTNHITGIQLTRLEPFDNSVSMIDGGNSFTDDDAEDAATSAVFSQLVNPRGR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00925 843 Gene3D Phosphorylase Kinase; domain 1 460 577 - -
Lapu5g00925 843 FunFam Putative receptor-like protein kinase 33 183 - -
Lapu5g00925 843 PANTHER OS07G0166700 PROTEIN 488 779 IPR045272 GO:0004714|GO:0006468
Lapu5g00925 843 FunFam Receptor-like protein kinase FERONIA 578 794 - -
Lapu5g00925 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Lapu5g00925 843 FunFam receptor-like protein kinase FERONIA 463 577 - -
Lapu5g00925 843 CDD STKc_IRAK 508 773 - -
Lapu5g00925 843 Gene3D - 206 388 - -
Lapu5g00925 843 Gene3D - 33 183 - -
Lapu5g00925 843 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Lapu5g00925 843 Pfam Malectin-like domain 36 385 IPR024788 -
Lapu5g00925 843 SUPERFAMILY Protein kinase-like (PK-like) 480 773 IPR011009 -
Lapu5g00925 843 Gene3D Transferase(Phosphotransferase) domain 1 578 797 - -
Lapu5g00925 843 FunFam Receptor-like protein kinase FERONIA 207 388 - -
Lapu5g00925 843 SMART serkin_6 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00925 843 ProSiteProfiles Protein kinase domain profile. 502 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00925 843 Pfam Protein tyrosine and serine/threonine kinase 507 768 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00925 Lapu-Chr5 15546680 15550204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00925 4 843 Receptor kinase-like Gene Family AT3G46290 51.465 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu5g00925 Malectin_like 1.1e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00925 - - gmx:100809700 1378.23