Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00920 ATGAAAGCATTGGATGTTATTCGAATGTGCAAAGAGGATCAAGAGCTAGTTTTTATGATGCTGGCTGCGATATTATGGTTGGGAAATATATCATTCCAAGTTACTGATAATGAAAATCACATTGAGGTCGTGAATGATGAAGCTGTAACAAATGCTGCTGTGCTAATGGGTTGCAGTTCCCAGGAGCTAATGGCAGCGTTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACCAAGACATTGACCTTGCGGCAGGCAATTGATGCAAGAGATGCATTAGCAAAGTTTATCTATGCAAACTTGTTTGACTGGCTTGTAGAACAAGTTAATAAGTCACTTGAAGTGGGTAAACGATGTACTGGGAGATCCATAAGTATCCTTGACATTTATGGATTTGAGTCATTCCTGAATAACAGCTTTGAACAATTTTGTATAAACTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCACCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGCATTGATTGGACCAAAGTAGACTTTGAGGACAACCAAGTGTGTTTGGATCTCTTTGAAAAGAAGCCTCTTGGGCTATTCTCTTTGTTGGACGAGGAATCAAATTTCCCCAGGGCCACTGATTTAACTCTTGCCAACAAACTTAAGCAGCACCTGCATGCTAATCCTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTTAGTGTCTGTCATTACGCAGGGGAGGTTTTGTATGATACAAGTGGCTTCCTAGAAAAGAATAGAGATCCACTACCAGCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAACTGCTTCAGTTGTTCTCCAAGAGGCTTAATCAGCCTCAGAAGCAATCAAATTTCTCGCATGGAGGTGCTCTAGACTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGCATCAGCTAGAGAGCACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAATTTCCTGGAATATATGATCAAGATCTTGTTCTACAACAGCTCAAGTGCTGTGGAGTTTTGGAGGTTGTTAGGATTTCGAGGGCTGGATATCCTACACGAATGACACATCAAGAATTCTCAAGAAGGTATGGGTTTCTGCTTTCTGAGGCAAACACATCTCAGGACCCATTGAGCATTTCAGTTGCGGTTTTGCAACAGTTTAATATCCCTCCGGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACTGGGCAGATTGGGGCACTGGAGGACAAGAGAAAATATCTTTTGCAGGGACTACTTGCTATTCAAAAAAGCTTTCGTGGTTATCAAGCTCGCTGTCATTACCATGAGCTTAAGAAGGGAGTTACTACTTTACAATCATTTGTTCGTGGAGAAATTGGAAGAAGGGAATATGGTGTTATGGTGAAGTCTTCCATTACTGTTTCTTCCGAAAATATTAAGGAGATGCAGGCAGCCACTACATTACAATCTGTAACTCGTGGATGGCTGGTTCGGAGGAATTCCAGCTTGAATAAGCCAAAGAAAAGTCCTGAAAATGCAAGATCTAGGCGAAGATCACGTGTGAAGATGCCTGAAGAAAAGAATGTGTCGAGTGAGCGGGTCCAGAATCTACCTTCAGCTTTAGCTGAACTCCAAAGGCGGGTTGTCAAGGCTGAAGCTACCATAGAGCAAAAGGAAGGGGAAAATGCTGAACTGAAGGATCAGCTAAAACAGTTTGAGGGTCGATGGATTGAATACGAGAAAAGGATGAAATCAATGGAGGAGATGTGGCAAAAACAGATGGCATCTTTGCAAATGAGCCTTGCTGCTGCTAGAAAGAGCCTTGCTTCTGAGAATGCCAGCAATCATGCAAGACGTGATGTATCATCACCTTTCGGCTATGATTCGGAAGATGCTACTTCCATGGGATCTCAAACACCTGGTGCAAGCACACCTTTGAAGTATTCTACTAGTATTTCTGAAGCAGGACTAAGGAGAGATGCTCATGGTACTTTGGCTTCAGTCAGCCACCTGATGAAGGAATTTGATCAACGCAGACAGACCTTTGATTATGATGCCAGAAATCTGGTTGAGGTTAGAACAGGTCAATCTGCTAACACAAATTCCATTGAAGAACTTCGGAAACTCAAACATAGGTTTGAGGGGTGGAAGAAAGAATACAAGGCTAGATTAAAAGAAACAAAAGCAAGACTTCAAAAAGTAGGGAATTCAGAAATGGATAAAAGGCGGAGATGGTGGGGGAAACTGAGTTCTAGAGCACACTATAGCTAG 2322 0.4199 MKALDVIRMCKEDQELVFMMLAAILWLGNISFQVTDNENHIEVVNDEAVTNAAVLMGCSSQELMAALSTHKIQAGKDTITKTLTLRQAIDARDALAKFIYANLFDWLVEQVNKSLEVGKRCTGRSISILDIYGFESFLNNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQVCLDLFEKKPLGLFSLLDEESNFPRATDLTLANKLKQHLHANPCFKGERGRAFSVCHYAGEVLYDTSGFLEKNRDPLPADSIQLLSSCSCELLQLFSKRLNQPQKQSNFSHGGALDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQFPGIYDQDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSRRYGFLLSEANTSQDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQIGALEDKRKYLLQGLLAIQKSFRGYQARCHYHELKKGVTTLQSFVRGEIGRREYGVMVKSSITVSSENIKEMQAATTLQSVTRGWLVRRNSSLNKPKKSPENARSRRRSRVKMPEEKNVSSERVQNLPSALAELQRRVVKAEATIEQKEGENAELKDQLKQFEGRWIEYEKRMKSMEEMWQKQMASLQMSLAAARKSLASENASNHARRDVSSPFGYDSEDATSMGSQTPGASTPLKYSTSISEAGLRRDAHGTLASVSHLMKEFDQRRQTFDYDARNLVEVRTGQSANTNSIEELRKLKHRFEGWKKEYKARLKETKARLQKVGNSEMDKRRRWWGKLSSRAHYS* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00920 773 Coils Coil 558 599 - -
Lapu5g00920 773 SMART iq_5 497 519 IPR000048 GO:0005515
Lapu5g00920 773 SMART iq_5 460 482 IPR000048 GO:0005515
Lapu5g00920 773 SMART iq_5 437 459 IPR000048 GO:0005515
Lapu5g00920 773 Pfam IQ calmodulin-binding motif 445 459 IPR000048 GO:0005515
Lapu5g00920 773 Pfam IQ calmodulin-binding motif 500 517 IPR000048 GO:0005515
Lapu5g00920 773 MobiDBLite consensus disorder prediction 644 666 - -
Lapu5g00920 773 MobiDBLite consensus disorder prediction 516 551 - -
Lapu5g00920 773 Pfam Myosin head (motor domain) 2 424 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g00920 773 MobiDBLite consensus disorder prediction 627 666 - -
Lapu5g00920 773 Gene3D - 135 326 - -
Lapu5g00920 773 PRINTS Myosin heavy chain signature 125 153 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g00920 773 PRINTS Myosin heavy chain signature 178 206 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g00920 773 ProSiteProfiles IQ motif profile. 438 467 IPR000048 GO:0005515
Lapu5g00920 773 FunFam Myosin IE heavy chain 6 114 - -
Lapu5g00920 773 ProSiteProfiles IQ motif profile. 498 527 IPR000048 GO:0005515
Lapu5g00920 773 SMART MYSc_2a 1 437 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g00920 773 ProSiteProfiles Myosin motor domain profile. 1 436 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lapu5g00920 773 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 486 IPR027417 -
Lapu5g00920 773 Gene3D - 369 437 - -
Lapu5g00920 773 ProSiteProfiles IQ motif profile. 461 490 IPR000048 GO:0005515
Lapu5g00920 773 Coils Coil 734 754 - -
Lapu5g00920 773 Gene3D Myosin VI head, motor domain, U50 subdomain 10 304 - -
Lapu5g00920 773 FunFam Unconventional myosin-XIX 137 326 - -
Lapu5g00920 773 Gene3D - 442 488 - -
Lapu5g00920 773 Gene3D Kinesin motor domain 118 365 IPR036961 -
Lapu5g00920 773 PANTHER MYOSIN 1 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00920 Lapu-Chr5 15283187 15293900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00920 1 765 Myosins gene family AT5G54280 62.131 0.0 994
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00920 K10357 - gmx:100801876 1351.27