Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00919 ATGGCAGCAACATTGATGGCAGCAACAACAAGTTCTGGCACTGTTCTTAAACCAACTCCTTTCCTTGGCCAAGGCAAGGGTGCCCATGCCAATCCTCTCAGGGATGTTGTCTCAATGGGAACCGGCAAGTACACCATGCAGAGCAATGAGTTGTGGTATGGACCAGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAAACCCCTTCATACTTGAAGGGAGAATTTCCAGGTGATTATGGATGGGACACTGCTGGCTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTGGGCTGCATCACCCCAGAGGTGCTAGCGAAGTGGTTGAGAGTGGAGTTCAAGGAGCCAGTGTGGTTCAAAGCTGGGTCCCAGATATTCTCAGAAGGTGGGCTTGACTATTTGGGGAACCCAAACCTTGTTCATGCCCAAAGCATCTTGGCAGTGCTGGGCTTTCAAGTTGTGCTGATGGGCCTCGTTGAAGGGTTCCGCATCAATGGGCTTGATGGAGTAGGAGAGGGCAACAACCTCTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTTGCTGATGACCCAGTCACTTTTGCTGAGCTTAAAGTGAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGGTTTTTTGTTCAAGCCATTGTAACTGGAAAAGGCCCATTGGAGAACCTTTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACCAAGTTTGCTCCTGGATCTTAA 813 0.5055 MAATLMAATTSSGTVLKPTPFLGQGKGAHANPLRDVVSMGTGKYTMQSNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLAKWLRVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFAPGS* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00919 270 Pfam Chlorophyll A-B binding protein 69 236 IPR022796 -
Lapu5g00919 270 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 39 269 IPR001344 GO:0009765|GO:0016020
Lapu5g00919 270 FunFam Chlorophyll a-b binding protein, chloroplastic 59 263 - -
Lapu5g00919 270 Gene3D Chlorophyll a/b binding protein domain 59 263 - -
Lapu5g00919 270 SUPERFAMILY Chlorophyll a-b binding protein 51 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00919 Lapu-Chr5 15280267 15282780 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00919 1 269 Chloroplast and Mitochondria Gene Families AT3G27690 68.266 1.45e-121 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00919 K08914 - gmx:100779387 520.776