Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00889 ATGGAAAGATTTACCTTGCTTCTGTTCTGCCTTGCTTTGCTGAATAGTATAGCAGCTGCCACTGTGAGAGAAACTACTAATGTATTGCAATCTATCAGTGATCGCGAGATCATTGTTTCACCTGGCAAAACCTATGCACTGGGATTCTTCAGTCCAAGCAATTCCAAGAACCGTTATGTGGGAATTTGGTATAATGAGATCCCAACAAAGACTGTAGTATGGGTTGCCAACAGAGACAACCCTCTTACTGACTCATCAGGGGTTTTGAAGCTCAATGAAACTGGAGTTCTCGTTCTTCTCAACCGCAACAAGAGTGTCATCTGGTCTTCCAACACAACAACTTCAGCACGACATCCGGTAGCAAAACTTTTGGATACTGGAAATCTCATTGTGCAGAATGGAAACGATACCGATGAGGAAAAAAATTTACTGTGGCAAAGTTTTGATTATCCAGTGGACACAATCTTGCCAGGACAGAAGTTTGGAAGAAATCTAGTTACAGGTCTGAACCGATACATGTCATCATGGAATAGCTCTGAGGATCCATCTCATGGTGTATATAGTTATCAACTTGATATCACTGGATATCCGCAGTTTGTTTTGAGAGAAGGAACGTTCAAAAGATATCGTTTTGGATCTTGGAATGGTATTCAGTTCAGTGGGGCACCTTTGTTGAAACAGAGTGATTTTACTAGATTTAGTTTTATTTCTGACGAGGAGGAGTTGTACTTTAGATTTGAGCGTACCAACAAGTCATTTTTACATAGGATGGTTTTAACAACAGATGGACATATCCTGGGGACTTACTGGGACAATGAACGGAAAATTTGGAACTTGCATGCACGAATTCCAGTGGATGACTGTGATTACTATGGCAAATGTGGAGCCTATGCTAGCTGCAATATAGACAACATCCCTCCATGTAAGTGCTTGGATGGATTTGTACCCAAAACGGCTGACCTGTATGGTCGTTGTGTCAGGAGAACTTCACTGAGTTGTCATGAAGACGGGTTTTTGCGGGTTTCAGGGTTGAAGTTACCCGACACAGAGAGATCCTGGTATTCCAGAAATATGAGCCTTGAGGATTGCAAGATATTGTGTTTGAACAATTGCTCCTGTACAGCTTATGCAGCATTGGATGTCAGTAAAGTACCAAGAGGGTGTTTACTCTGGTTTAGTGACCTGGTTGACATACGAAAATTGACCGATGTTGATGAAGATGTATACTTAAGGATGGCTAAGACAGAACTAGAAGCAATTGAAGGAAAGCAATTACATAAATCCAACATCCGGAAGCAAGAGACTGTTTTCATAAGTTGTGTGTTGTTTATTGGAATTTTAATACTATGTTTAACCTTCATCCTTTATAGACGGATGAAGACACGGCAGAAAGGAAAGATGGAAGGTAATCTAGAAGAAAGAGATGATGTGAATGTAATAAATGAGCACGAGAGGGAAGATCTAGAGTTACCCATGTTTGAGTTGTCTACAATTACTTCTGCAACCAATAACTTTTCAGATGATAACAAACTAGGGGAAGGTGGCTTTGGATCAGTTTATAAGGGCATCCTTGCCGATGGAGGAGAAATAGCTGTCAAGAGGCTCTCTACAAATTCGAAACAAGGACTTCCAGAGTTCAAAAATGAAGTTATGCATATTGCAAAGCTTCAGCACAGGAATTTAGTGAGGCTACTAGGGTACTGCCTTCAAGCAGGAGAAAGATTGCTTGTTTATGAATTTATGCCCAACAAAAGCTTGGATTCCTTCATATTTGATGAAAACAAGAGCATGTTACTAGATTGGCCAAGGCGCTTGCTGATTATCAATGGGGTTGCTCGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCATAGAATAGTTCACAGAGATCTCAAAGCCGGAAATGTTTTGTTAGACAATGAAATGAACCCAAAAATATCGGACTTTGGACTGGCTAGAAGCTTTGGAGGAAATGAAATTGAAGCAACCACAAAACATGTAGTTGGAACCTATGGCTATCTGCCTCCAGAATATATAATTGATGGAGCTTATTCAACGAAGTCAGATGTTTTCAGCTTTGGTGTGTTGATATTGGAGATAGTAAGTGGGAAAAGAAATAAAGGATTCTGTCATCAAGATAATCTGCTGGCACATGTATGGAGACTATTTACTGAAGGCAAATGTTCTGAAATAGTTGACGCAACCATAACAGACTCACTCCATTTATCTGAAGCTCTAAGATCAATTCATGTGGGACTACTGTGTGTGCAACTATGTCCAGACGATAGGCCAAGCATGTCATCTGTGGTTCTTATGCTGAGCAGCGAATCTGCACTGCCTCAGCCAAACTTGCCTGGATTCTTTACAAGTGCAAGTATGGTTGGGGATAGTTCTTCATCAAGCAGTCATCAACAATACACAAATAATGAAATGTCACTTAGCATAATGTCTGCTAGATAG 2460 0.4045 MERFTLLLFCLALLNSIAAATVRETTNVLQSISDREIIVSPGKTYALGFFSPSNSKNRYVGIWYNEIPTKTVVWVANRDNPLTDSSGVLKLNETGVLVLLNRNKSVIWSSNTTTSARHPVAKLLDTGNLIVQNGNDTDEEKNLLWQSFDYPVDTILPGQKFGRNLVTGLNRYMSSWNSSEDPSHGVYSYQLDITGYPQFVLREGTFKRYRFGSWNGIQFSGAPLLKQSDFTRFSFISDEEELYFRFERTNKSFLHRMVLTTDGHILGTYWDNERKIWNLHARIPVDDCDYYGKCGAYASCNIDNIPPCKCLDGFVPKTADLYGRCVRRTSLSCHEDGFLRVSGLKLPDTERSWYSRNMSLEDCKILCLNNCSCTAYAALDVSKVPRGCLLWFSDLVDIRKLTDVDEDVYLRMAKTELEAIEGKQLHKSNIRKQETVFISCVLFIGILILCLTFILYRRMKTRQKGKMEGNLEERDDVNVINEHEREDLELPMFELSTITSATNNFSDDNKLGEGGFGSVYKGILADGGEIAVKRLSTNSKQGLPEFKNEVMHIAKLQHRNLVRLLGYCLQAGERLLVYEFMPNKSLDSFIFDENKSMLLDWPRRLLIINGVARGLLYLHQDSRHRIVHRDLKAGNVLLDNEMNPKISDFGLARSFGGNEIEATTKHVVGTYGYLPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNKGFCHQDNLLAHVWRLFTEGKCSEIVDATITDSLHLSEALRSIHVGLLCVQLCPDDRPSMSSVVLMLSSESALPQPNLPGFFTSASMVGDSSSSSSHQQYTNNEMSLSIMSAR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00889 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 148 - -
Lapu5g00889 819 Gene3D - 19 148 IPR036426 -
Lapu5g00889 819 Gene3D Hepatocyte Growth Factor 331 413 - -
Lapu5g00889 819 CDD PAN_AP_plant 329 413 - -
Lapu5g00889 819 SMART ntp_6 333 412 IPR003609 -
Lapu5g00889 819 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Lapu5g00889 819 Pfam Protein kinase domain 506 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00889 819 SMART serkin_6 505 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00889 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Lapu5g00889 819 Pfam Domain of unknown function (DUF3403) 774 819 IPR021820 GO:0004674
Lapu5g00889 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Lapu5g00889 819 CDD B_lectin 30 151 IPR001480 -
Lapu5g00889 819 Gene3D Phosphorylase Kinase; domain 1 466 580 - -
Lapu5g00889 819 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Lapu5g00889 819 SMART blect_4 29 151 IPR001480 -
Lapu5g00889 819 Gene3D Transferase(Phosphotransferase) domain 1 581 781 - -
Lapu5g00889 819 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Lapu5g00889 819 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 764 - -
Lapu5g00889 819 SUPERFAMILY Protein kinase-like (PK-like) 489 773 IPR011009 -
Lapu5g00889 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Lapu5g00889 819 CDD STKc_IRAK 511 773 - -
Lapu5g00889 819 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Lapu5g00889 819 ProSiteProfiles Protein kinase domain profile. 505 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00889 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 580 - -
Lapu5g00889 819 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 581 781 - -
Lapu5g00889 819 Pfam D-mannose binding lectin 71 176 IPR001480 -
Lapu5g00889 819 Pfam PAN-like domain 333 398 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00889 Lapu-Chr5 13127514 13131923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00889 445 792 Receptor kinase-like Gene Family AT3G45860 52.825 1.06e-119 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g00889 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00889 - - vun:114184694 1460.66