Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00875 ATGAATCCAAAAATATCAGATTTTGGTCTTGCTACACCATTTGGCGGAGATGAAGTTAAGGGGAAAACAAAGAGAATTGTGGGAACTTATGGCTATATTTCTTCAGAATATGCAACACGTGGGAATTTTTCGGTGAAATCTGATGTATTCAGTTTTGGAGTTATATTACTTGAGACAGTTTGTGGTAAAAAGAATAGGAAATATTTTGACCATCATGATTGTCACCTTCTTGGATATGTATGGAGACTTTGGTGTGAAGGAAAACTAATGGAGTTGATAGATGAATCACTGTGTGAATCAATAGCTCTAGTTGAAGCTGATGTATTGAGATGTATTCACATTGGGCTTTTATGTGTACAAGACAGAGCTGAGGATAGGCCAAATATGTCATTAATAGTTCTAATGCTGAATGGTGAGAAACCGTTGCCTAGGCCAAGGGAACCCGCTTTTTATCCCCATCAATCTGGCTCTTCATCAGGAAATAGTAAACTGCAATCAACTAATGGGCTTTCTATGTCATCGTTAGATGCAAGATAG 537 0.3762 MNPKISDFGLATPFGGDEVKGKTKRIVGTYGYISSEYATRGNFSVKSDVFSFGVILLETVCGKKNRKYFDHHDCHLLGYVWRLWCEGKLMELIDESLCESIALVEADVLRCIHIGLLCVQDRAEDRPNMSLIVLMLNGEKPLPRPREPAFYPHQSGSSSGNSKLQSTNGLSMSSLDAR* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00875 178 SUPERFAMILY Protein kinase-like (PK-like) 1 153 IPR011009 -
Lapu5g00875 178 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00875 178 MobiDBLite consensus disorder prediction 152 178 - -
Lapu5g00875 178 Pfam Protein tyrosine and serine/threonine kinase 4 80 IPR001245 GO:0004672|GO:0006468
Lapu5g00875 178 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 174 - -
Lapu5g00875 178 Gene3D Transferase(Phosphotransferase) domain 1 1 142 - -
Lapu5g00875 178 MobiDBLite consensus disorder prediction 144 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00875 Lapu-Chr5 12658261 12661887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00875 1 178 Receptor kinase-like Gene Family AT4G23150 44.444 1.45e-47 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu5g00875 PK_Tyr_Ser-Thr 7.3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00875 - - ccaj:109805721 272.707