Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00842 ATGGTGGGAACTCCTATTAACGGAAGAACAAGGCCAGCTTTTGGTGTTGTAAATGGTGGCCATGATCTTGGCCCCAGTAGTGCTCCACCAAGCAATGCTGGCTCAGATTATGGTATTATAGAGTTCACCAGGGAGGATGTGGAGACCCTGCTGAACGAAAAGGCCAAAAAGAAAGACAGGTTTAATTATAAGGAAAGATGTGAAAATATGATGGATTACATAAAAAGGCTGAAGGTTTGCATCAGGTGGTTCCAAGACCTTGAGATTAGCTACTCACTAGAGCATGAAAAATTGAAGAGTTCATTGGAATTAGCCCAGAAAAAATGCATGGAGATAGAGTTGTTACTCAAAATTAAGGAAGATGAACTAAACTCAATTATTGTTGAAATGAGACGGAATTGCACTTCTTTACAAGAGAAATTAGTGAAGGAAGAATCAGAAAAAACAGCGGCAGCAGAATCTCTTGTTAAGGAGAGAGAGGCCAGGCTTAACTTTGAGAGGTCACAGAATACACTACAGGAAGATCTTGGGAGAGCACAACGGGAGCTCCAAAGCGCAAATCAGAAGATATCATCACTCAATGACATGTATAAGCGGTTACAAGATTACATAACGAGCTTGCAGCAGTACAATGGTAAACTTCATTCAGAGCTTTCTTCAGTTGAAACTGACCTTAAGCGGGTGGAGAAAGAGAAAGCTACTGTGGTGGAGAACCTTACTATGTTGAAGGGCCAGCTTACTTTGTGTATGTCTTCTCAAGAAGAGGCCACAAAACAGAAGGATGCCTTGGCCAGTGAAGTTGGTTCTCTTCGTGTTGAGTTGCAACAAGTGAGGGATGATCGGGACCGCCAACTATCTCAAGTGCAAACTTTGACTTCTGAATTAGAGAAGTCTAAAGATTCTACGGAGAAATCCTGCTCTGAACTGAACAATTTGACCATAAAAACAAATGAACTGGAGGAAAAATGTGCTTTGCAAGATGAGCGGATAAAGGTGCTGCAAGAGAAGCTCACCACTGCAGAGGAGAAACTGCAGGTTTCTGACATATCTGCAAGTGAGACAAGAACAGAATTTGAAGGGCAACAAAAACTTGTACATGTGTTGCAAAGACGTTTGGAAGATGCAGAATATAAAATTATAGTAGGGGAGAAGCTGAGGAAAGAATTACACAATACAATTTTGGAACTGAAAGGGAACATCCGCGTGTTCTGTAGAGTGCGGCCTTTGTTACCTGATGAGACTTGTAGCACACAAGGAAAGGTTATATCTTATCCCACATCAATGGAAGCTTCTGGAAGGGGCATCGAATTGACACAAAGTGGCCAAAAACATTCATTCACATTTGATAAAGTTTTTGCACCTGATGCATTACAAGAAGAAGTTTTTATTGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTATAAGGTTTGTATTTTTGCCTATGGTCAGACAGGGTCAGGGAAAACTTACACAATGATGGGCAGGCCTGGACATCCAGAAGAAAAGGGCTTGATCCCTCGTTCACTAGAACAAATATTTCAAGCAAAACAGACTCAGAAACCCCAAGGCTGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAACCATTCGTGATTTGTTATCTACAAATAAGTCATCCTCAGATGGAACACCAACACGTATGGAAAATGGTACTCCTGGGAAGCAATACTCCATCAAACATGATGCCAATGGAAATACACACGTTTCTGATCTTACAGTAGTGGATGTTCAGAGTGTAAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCTAATAGCAGATCTGTGGGCAAAACTCAGATGAATGAACAATCTTCTAGAAGTCATTTTGTATTCACTCTTCGAATATATGGTGTGAATGAGAGCACTGACCAACAAGTACAAGGCATTCTAAATCTCATTGATCTTGCTGGGAGTGAGCGACTTTCAAGAAGTGGTTCTACCGGGGACCGATTGAAAGAAACTCAAGCAATAAATAAGAGTCTGTCATCATTAAGTGACGTCATATTTTCCTTGGCCAAGAAGGAGGATCATATCCCATTCAGGAACTCAAAGCTTACATACCTACTTCAGCCTTGTCTAGGTGGGGACTCAAAAACATTGATGTTTGTCAACATCTCTCCTGACCAAGCTTCAGCAGGAGAGTCACTGTGCTCACTCCGGTTTGCATCAAGAGTTAATGCATGTGAAATTGGAACACCACGCCGTCACACCAATGGACGTCCTATAGAATCTCGCTTGACCTACTTTTAA 2289 0.4124 MVGTPINGRTRPAFGVVNGGHDLGPSSAPPSNAGSDYGIIEFTREDVETLLNEKAKKKDRFNYKERCENMMDYIKRLKVCIRWFQDLEISYSLEHEKLKSSLELAQKKCMEIELLLKIKEDELNSIIVEMRRNCTSLQEKLVKEESEKTAAAESLVKEREARLNFERSQNTLQEDLGRAQRELQSANQKISSLNDMYKRLQDYITSLQQYNGKLHSELSSVETDLKRVEKEKATVVENLTMLKGQLTLCMSSQEEATKQKDALASEVGSLRVELQQVRDDRDRQLSQVQTLTSELEKSKDSTEKSCSELNNLTIKTNELEEKCALQDERIKVLQEKLTTAEEKLQVSDISASETRTEFEGQQKLVHVLQRRLEDAEYKIIVGEKLRKELHNTILELKGNIRVFCRVRPLLPDETCSTQGKVISYPTSMEASGRGIELTQSGQKHSFTFDKVFAPDALQEEVFIEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQAKQTQKPQGWKYEMQVSMLEIYNETIRDLLSTNKSSSDGTPTRMENGTPGKQYSIKHDANGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFSLAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASAGESLCSLRFASRVNACEIGTPRRHTNGRPIESRLTYF* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00842 762 Coils Coil 309 343 - -
Lapu5g00842 762 Coils Coil 274 294 - -
Lapu5g00842 762 Coils Coil 169 203 - -
Lapu5g00842 762 FunFam Kinesin-like protein 345 743 - -
Lapu5g00842 762 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00842 762 PRINTS Kinesin heavy chain signature 611 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00842 762 PRINTS Kinesin heavy chain signature 642 660 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00842 762 PRINTS Kinesin heavy chain signature 691 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00842 762 MobiDBLite consensus disorder prediction 1 32 - -
Lapu5g00842 762 Coils Coil 40 60 - -
Lapu5g00842 762 CDD KISc_C_terminal 397 743 - -
Lapu5g00842 762 Coils Coil 127 147 - -
Lapu5g00842 762 Pfam Kinesin motor domain 405 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00842 762 Coils Coil 211 245 - -
Lapu5g00842 762 Gene3D Kinesin motor domain 345 743 IPR036961 -
Lapu5g00842 762 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 359 739 IPR027417 -
Lapu5g00842 762 PANTHER KINESIN-LIKE PROTEIN KLP-3 57 748 IPR027640 GO:0003777|GO:0007018
Lapu5g00842 762 SMART kinesin_4 397 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu5g00842 762 SUPERFAMILY Tropomyosin 217 389 - -
Lapu5g00842 762 Coils Coil 102 122 - -
Lapu5g00842 762 ProSiteProfiles Kinesin motor domain profile. 399 741 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00842 Lapu-Chr5 9019481 9025959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00842 375 753 Calmodulin-binding Proteins AT5G65930 37.533 5.08e-76 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00842 K10405 - gmx:100801196 1354.73