Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00833 ATGGAAGAAACTACTAATTCAAAAGCCTCCTCCTCCTACCAAACAAAAAAAACAATAATAAAATCACTAACAATCCATCTCTTCCTTTTCTTGAGCCTCCATGTCTCCCATGTCCAAGCACAGAAAAAACCATTGTCATCGCAACCATCTTCGCTCGAACTCGAGGGCTGCGATGGAGTATTTCTCTCGTACGCCCTGGTGGCGCGGGAGAAGGAGTATCCGCACGTGAAGAACGCGTCGAAGCAGGCGTGGGCCTTCAAGGCGGAGGCCACGGTGACGAATGTGGGAGATGAGGAGGTGCAGGGATGGAAGATGTTTGTGGGGTTCCAGCACCGCGAGGTTCTGGTCTCCGCAGACGGCGCCATTCTCATCGATGCCGGCGATTTTCCGGCGGAGGTGGACAATGGGACGACCCTGGTGGGGTCCGCCGTGACGGACTTGAAGACCGCCATTGAAACCGCCGGGGATATGAGCCAGATGAGCGCGAAGATCGATATTGTTGGGACGCATTTTGGATTGGGTGCTGGAGCTACGCCCATGCCCAAAACCATTCGTCTCGAGAATGATGGATTCAAATGCCCTGCACCTACTCGTCGAGCGGCGAGAATGTCGGCATGTTGCAGAAAGGACCCGAGAGTGAAGGCAAAGGTAGCAAAGAAAACCAAGTACCCTCCTCGTCGCGCTGGAGACCTAACCATAGCATACGACGTGCTTCAAGCTTTCCAGAACAACTACTATACCCAAGTCACAATAGAGAACAAACACCCATTGGGTCGTCTTGATCATTGGAACTTGACATGGGAATGGCCGAACGGAGAGTTCATATATTCCCTGAAAGGAGCTTATGCTCGCAGAAAAGATCCTTCTGAGTGCTTGTATGGTACAGCTGGAAAATTCTACAATGACATGGATTTCACAGAAGTTGCAACCTGTCAGAAGAAGCCAACAATCTCTGACCTTCCAGCAGAAAGAGCAGAAGATGAAAAAGTTGGGAAACTCCCTTTTTGCTGCAGGAACGGTACCGTTTTGCCTCCAGTCATGGACAAGAACAAAGCTAAGTCAATGTTCCAGATGCAAGTGTTCAAAATGCCACCAGACACTGAGAACAGAACGTCCATCACACCCCCTATAAAGTGGAACATCGATGGTGTCATCAATCCATATTACAAATGTGGTGCACCGGTTAGGGTTGACCCAGCGGTTTTCCCTGACCCCAGTGGACTAAGTGCGATCACCACAGCTGTTGCAAGTTGGCAAATAGTTTGCAACATCACCAAACCCAAGCCTCAGCAAAACCGTTGCTGCGTCTCCTTCTCAGCATTCTACAACGAATCAGCAATCCCTTGCAACACGTGTGCATGTGGCTGCGATGACACAAGGAAGTGCAACTCCAGGGCCTCTCCATTGCTTCTTCCACCAGAGGCTCTTCTTGTGCCGTTCGTAAACAGGACCCTGAAGGCAAAAGCATGGGCCAAACTCAAACACTTGCGCGTTCCCAGCAAGCTCCCTTGTGCAGATAACTGCCCCGTCAGCATCAACTGGCACGTGAGTTCAGATCACAAGGATGGATGGACGGCCAGGATCACACTTTTCAACTGGGAGGATTACTCCTTTGAAGATTGGTTCACTGCGATTCAGCTGACGAAGACTTACGAGGATTTTAAAGATGTTTACTCCTTCAACGGGACAAGAATTCCTGGTCTCAAAACCATTTTCTTAGAGGGCCTAAAGGGTTTGAATTACTTGGCTGGAGAGACCAATGGAACACACGCTGGAGAGCCTAGAGTGCCAGGGAAACAACAATCCGTGGTTTCTTTCAGCAAGAAGCGCGTAAAACACTTTGATGTCACAAAAGATGGGTTCCCCTCTAAGGTTTTCTTCAATGGAATGGAGTGTTCTCTTCCTCCGATTAGACCAGGCAAAAGTTCGGGTCACAAATCTTCCATCAGTGTCATTGCACTCATATTGACAGCGTTTGTGACTTTCTTGCTGATCTAA 1998 0.493 MEETTNSKASSSYQTKKTIIKSLTIHLFLFLSLHVSHVQAQKKPLSSQPSSLELEGCDGVFLSYALVAREKEYPHVKNASKQAWAFKAEATVTNVGDEEVQGWKMFVGFQHREVLVSADGAILIDAGDFPAEVDNGTTLVGSAVTDLKTAIETAGDMSQMSAKIDIVGTHFGLGAGATPMPKTIRLENDGFKCPAPTRRAARMSACCRKDPRVKAKVAKKTKYPPRRAGDLTIAYDVLQAFQNNYYTQVTIENKHPLGRLDHWNLTWEWPNGEFIYSLKGAYARRKDPSECLYGTAGKFYNDMDFTEVATCQKKPTISDLPAERAEDEKVGKLPFCCRNGTVLPPVMDKNKAKSMFQMQVFKMPPDTENRTSITPPIKWNIDGVINPYYKCGAPVRVDPAVFPDPSGLSAITTAVASWQIVCNITKPKPQQNRCCVSFSAFYNESAIPCNTCACGCDDTRKCNSRASPLLLPPEALLVPFVNRTLKAKAWAKLKHLRVPSKLPCADNCPVSINWHVSSDHKDGWTARITLFNWEDYSFEDWFTAIQLTKTYEDFKDVYSFNGTRIPGLKTIFLEGLKGLNYLAGETNGTHAGEPRVPGKQQSVVSFSKKRVKHFDVTKDGFPSKVFFNGMECSLPPIRPGKSSGHKSSISVIALILTAFVTFLLI* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00833 665 Pfam COBRA-like protein 245 425 IPR006918 GO:0010215|GO:0016020
Lapu5g00833 665 PANTHER COBRA-LIKE PROTEIN 7 17 664 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00833 Lapu-Chr5 8679956 8682562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00833 22 665 COBRA Gene Family AT3G20580 58.104 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00833 - - gmx:100789175 1134.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00833 5 8679956 8682562 Lapu5g00833 5 8679956 8682562 ECH