Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00828 ATGAGCACAGAACTTCATTTGCCTTCACCTATTTTATTGACAAGGGAGTGTTATTTTGGAAGGTATAGCAAACAGTTATCTCATAGCACATGGGGTGTCGTCGATGTATCATTGGAGAAATTTCTTCCTTCCCCAACCAACAACTTTTTGAAAAGGCCATCAGGATGTTTGATTGCTAGAATGCCTAATGGATATTCTAAGGTTATATGGGTCGAGCATGTAGAAGCAAAACATAGTCATGTGGACCATTATTTCCAGTCTCTATTCACATCCACTCTAGCTTTTGGTGCAACCCGTTGGATTAATTCCTTAGTTCAATATGGTGAATGGTTACAAAGTCTATTTGCAACAACGTTTGTTGCTGATGATGGAGTTCTTATAGCTCAAAGTGGGAGGACTAGCTTCTTGAAACTAGCAAATAGAATGATGAAAACATTTTGTGGAAATGTGAGTTCTACTGTAGACAATCAATGGACTCAAATGGAATATTCACCATGCGTGAGAATCATGGTGAAGAATAATAACATGGAAGAAAATGGAAAACCTCCTGGTACATCTGTGGTTTTCACTACTTCTGTTTGGCTAGATGTTTGCCCAAATCGACTGTTCAACTTCCTTCGCCATGAGAATTCTAGAACCAAGTGGGATGCGCTTTCACGTAGACAAACTATTCGAGAATTTGCATCGATGCTCAAGGGTGAAAATCCAAGAAATCGTGTTTCCCTTATGCGAGCAATGAATTCACAGGGCAAGCTTGTAATATGTTATATACAAGAGAGTTACACAGACTCAACAGGTTCTTACGTGGTGTATGCTCCACTAGACGAACAAGCTGTGACAGCTCTTATACATGGAATCAACCCTGACAAAGTGATGATCCTGCCATCAGGGTTTAGCATACTTCCTGGAAGGTTGCAAGGAGATGAAGATAGAAGCACTCAAAGTCTTCTAACTATTGCATTTCATATAGTTGAAAGTCTCAATTGTAAGCCATATATTGCTCCTGAAGCTATCGAAACTATATACAAAGTCATTTCAAACACTGTTACCTCTATAACCGACTCAGTATTGTATCATAATCATCACAATAATTGGATGGATGATTAG 1107 0.3893 MSTELHLPSPILLTRECYFGRYSKQLSHSTWGVVDVSLEKFLPSPTNNFLKRPSGCLIARMPNGYSKVIWVEHVEAKHSHVDHYFQSLFTSTLAFGATRWINSLVQYGEWLQSLFATTFVADDGVLIAQSGRTSFLKLANRMMKTFCGNVSSTVDNQWTQMEYSPCVRIMVKNNNMEENGKPPGTSVVFTTSVWLDVCPNRLFNFLRHENSRTKWDALSRRQTIREFASMLKGENPRNRVSLMRAMNSQGKLVICYIQESYTDSTGSYVVYAPLDEQAVTALIHGINPDKVMILPSGFSILPGRLQGDEDRSTQSLLTIAFHIVESLNCKPYIAPEAIETIYKVISNTVTSITDSVLYHNHHNNWMDD* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00828 368 SUPERFAMILY Bet v1-like 3 111 - -
Lapu5g00828 368 ProSiteProfiles START domain profile. 1 113 IPR002913 GO:0008289
Lapu5g00828 368 Pfam START domain 1 106 IPR002913 GO:0008289
Lapu5g00828 368 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 355 IPR042160 -
Lapu5g00828 368 SUPERFAMILY Bet v1-like 131 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00828 Lapu-Chr5 8613895 8615433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00828 1 356 Homeobox Transcription Factor Family AT4G04890 41.489 1.51e-87 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00828 K09338 - jre:108992281 362.073