Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00824 ATGTTTTGGAGACAGGTCTTTGGTGGATCATTGTTTTCCAATTTTTTCTCATCAGAATCTGCTTCTTCTTCCAGTGACTCCGACACCATTCAAAACCAAGAATTTGCTTCTTCTTCCAATGACTCCGATTGCATCCAAAACCAGGACTTTAGATACGACGTGTTTCTTAGTTTCAGAGGTCCTGACACCCGCAACTCTTTCGTTGCTCATCTCCACTCTCATCTTCTCCGAAAGGGTATTTTTGTCTTTAAAGATGACCACAAGCTCCGCATAGGAGAATCCATTTCATTACAGCTCCCACAAGCAATCAAAGGTTCTCGGATTTCTATCATCGTCTTCTCCCAAGATTATCCTTCCTCATTATGGTGTTTGGAGGAAATGGCCGCTATAGCTGATTGCCAACAACAATCTAACCAAACTGTTTTCCCTGTTTTCTATGATGTTGATCCATCTCACGTGAGACATCAGAATGGGGTATACGAGAAGGCATTCGTTTCACTCAGACAGAAATTCAAAAGAGATGCAGACAAGGTTTGCCGTTGGGAGAAAGCTATGAACGGTTTTGGCAAATTGGCTGGTTGGGATGTCAGAAACAAGTCAGAATCTGAAGTAATTGAAGATATTGTTGAAAAGGTTATAAAAAAATTGGATCATAAATTCTCTGGGTTTGTTGATGACGTTGTTGGAATACAACCACGTGTACAAGCATTAGAAGATAAATTAAGATTAAGTTCAAAAAGTGATGATGTTAAAGTTTTAGGAATTTGGGGGATGAATGGAATAGGAAAGACTACTCATGCTACTGTCTTGTATGACAAAATCTCTCATAGGTTTGATGCCTCTTGTTTCATTGAGGATGTGAGCAAACTTTATAGGGATGGTGGCCATACTGCTGTTCAGAAAGAAATCATTTATCAAACTTTACGTGAAAACAGTCTACATATGAGTAATCCTATTGAAATATCAGGGATTGTAAAAAATAGGCTACAGAACATGAAGCTTCTCATAGTTCTTGACAATGTTGATGAATTAGAGCAATTGGAAAAATTGGCCATAAAACCTAAATTGCTTTTGAAGGGAAGTAGAATGGTTATTATCACCACAGATGAGCATATTCTGAAAGTGTATGAAGGGGGTGTATTAATACACAAGGTTTCATTATTGAATGATAATGATGCTCGTGAATTGTTTTGTAGAAAAGCCTTCAAAAGTGAAGAGCAAAGCATTAGTTGTGCGGCGTTGATTCCTGAGATATTGAAATATGCCCAATGTCTTCCATTGGCAATTAGAGTGTTGGGTTCTTTCTTGTGTACTAGAGATGCTGTTGAATGGAGAGATGCGTCGAATAGATTGGAGGAAAATCCAGATGATAAAATTATGAATGTACTTCAAATAAGTGTTGATGGACTACAGCATCAGGAAAAACAAATATTTTTACACATTGCTTGTTTCTTTAAAGGGGAGAGGGAGGATTATGTTAAGCGAATTCTTGAGTGTTTTGAATTACACCCTCACATTGGAATTTCAAGACTTATTGAGAAATCACTCATCTCTATTAGAGATCAAGAAATTCTTATGCATGAAATGATACAAGAATTGGGAAAGAAAATTGTTCGCGACCAATCTCCTGAAGAGCCAGGATCACGGAGTAGAATATGGCTTCATAAAGACTTCTTTCACGTTTTGACGAGAGGAACGGGAACAGAGAAGGTGAAAGCCATAGTTTTAAATAAAAAGGAAGAAATCTCGGAGTGTAGGGTTGATGCATTGTCAAAAATGAAGGAGCTTACATTGCTCATGTTATATCACACAGAAGTTTCAGGAAGCCTGGAGTTTCTTTCTGACAGGCTGCGATATCTTTTGTGGCATGATTATCCATTTACTTCTCTGCCTCCATATTTTACAGCCTCTAATCTTGTGGAATTGAATATGCCCAACAGTCATGTCAAGCGTCTATGGGAAGACCGCAAGAGCTGTCCTAACTTGAAAAGGATTGATTTAAGCAACTCCAGGCACCTGACTGAGACTCCAGATTTTTCCCGAATCATAAACCTTGTAAGGCTAGATCTTTCTGGATGTAGAAGTTTATCACGTGTCCATTCATCAATTGGACTTCTTAAGAAGCTTGCTTTCTTGAATTTACGTAATTGTTCGAATCTAGTTGCCATTGACTTTGGCTGTGTAGGTAACATGACTTCTCTGAGAGTTCTATATCTCTCGGGTTGTACTAAGCTTGAAAGCACCCCAGATTTTAGAAGGGCAACACGTCTTGAGTACCTAGACATGGATATATGTGCACGTTTATCCATTATTAATGAATCTATTGGAGTCCTTTCAAATCTTACATTCTTGAGTTTGAGATACTGCGGAAAGCTTGTCAGTATACCAAATGATATTAATTTGTTGTCATCTCTTCAAACTCTAGATTTATGTGGCTGTTTTAAACTTACTGATCAGCTCCCGAGACAAGCTTCTGCATCCCATTTGAAATCTTTGATTTTTCTGGACCTAGGTTCTTGCCATCTAGAAAAAGTACCTGATGCTATTGGAGAGCTAAGGTGTCTGGAAAGACTGAATCTACAGGGAAACTTGAGTTTAGTTTCAATACCTGATTCCTTCAGGGAGCTTCATTGTCTAGCATATTTAAACTTGTCTCGTTGTTATAAGCTCGAAGCTTTGCTTGACCTTCCAATGAGTGGAGCTACATCAGGGGGGAGATATTTTAAAACAGTATCCGGATCTCGTGATCGTAGGTCAGGCTTATATCTTTTTGGTTGTCACAAGATGACTAATATAGTGTCCAAACCTTGGGATTGTTGGAGTTTGGAACTTACATGGCTTTTCAGACTAATTAAGGAATCCTATCATTTTCGATGTGGCTTTGACATTGTTGTTCCTTGGAGTTTGGAAATTCCACGGTGGTTCATTAAAAGATTTGAAGGGGATAAGGTTACACGGATATTGGAATTTAATGTGGATGAAGACTGGATGGGTTTTGCCTTTGGTGTTATATTTCAGAGAAACAATGGTCCTAGGGTCGGTGATTATTCATCGCACCCGTTTTATCTTTCTTTCGCAAGTAAATATACAGAAGAATACTTTGATTTTCCACATAATCTGAAAAAGCAATGTCCTATTGGAACTCATCTTTGGATCATTTATATCTCGAGAGAGCACTGA 3180 0.383 MFWRQVFGGSLFSNFFSSESASSSSDSDTIQNQEFASSSNDSDCIQNQDFRYDVFLSFRGPDTRNSFVAHLHSHLLRKGIFVFKDDHKLRIGESISLQLPQAIKGSRISIIVFSQDYPSSLWCLEEMAAIADCQQQSNQTVFPVFYDVDPSHVRHQNGVYEKAFVSLRQKFKRDADKVCRWEKAMNGFGKLAGWDVRNKSESEVIEDIVEKVIKKLDHKFSGFVDDVVGIQPRVQALEDKLRLSSKSDDVKVLGIWGMNGIGKTTHATVLYDKISHRFDASCFIEDVSKLYRDGGHTAVQKEIIYQTLRENSLHMSNPIEISGIVKNRLQNMKLLIVLDNVDELEQLEKLAIKPKLLLKGSRMVIITTDEHILKVYEGGVLIHKVSLLNDNDARELFCRKAFKSEEQSISCAALIPEILKYAQCLPLAIRVLGSFLCTRDAVEWRDASNRLEENPDDKIMNVLQISVDGLQHQEKQIFLHIACFFKGEREDYVKRILECFELHPHIGISRLIEKSLISIRDQEILMHEMIQELGKKIVRDQSPEEPGSRSRIWLHKDFFHVLTRGTGTEKVKAIVLNKKEEISECRVDALSKMKELTLLMLYHTEVSGSLEFLSDRLRYLLWHDYPFTSLPPYFTASNLVELNMPNSHVKRLWEDRKSCPNLKRIDLSNSRHLTETPDFSRIINLVRLDLSGCRSLSRVHSSIGLLKKLAFLNLRNCSNLVAIDFGCVGNMTSLRVLYLSGCTKLESTPDFRRATRLEYLDMDICARLSIINESIGVLSNLTFLSLRYCGKLVSIPNDINLLSSLQTLDLCGCFKLTDQLPRQASASHLKSLIFLDLGSCHLEKVPDAIGELRCLERLNLQGNLSLVSIPDSFRELHCLAYLNLSRCYKLEALLDLPMSGATSGGRYFKTVSGSRDRRSGLYLFGCHKMTNIVSKPWDCWSLELTWLFRLIKESYHFRCGFDIVVPWSLEIPRWFIKRFEGDKVTRILEFNVDEDWMGFAFGVIFQRNNGPRVGDYSSHPFYLSFASKYTEEYFDFPHNLKKQCPIGTHLWIIYISREH* 1060
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00824 1059 SUPERFAMILY "Winged helix" DNA-binding domain 457 562 IPR036390 -
Lapu5g00824 1059 SUPERFAMILY L domain-like 587 952 - -
Lapu5g00824 1059 PRINTS Disease resistance protein signature 252 267 - -
Lapu5g00824 1059 PRINTS Disease resistance protein signature 729 745 - -
Lapu5g00824 1059 PRINTS Disease resistance protein signature 328 342 - -
Lapu5g00824 1059 PRINTS Disease resistance protein signature 422 436 - -
Lapu5g00824 1059 FunFam Disease resistance protein (TIR-NBS-LRR class) 48 218 - -
Lapu5g00824 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 481 IPR027417 -
Lapu5g00824 1059 SMART till_3 51 191 IPR000157 GO:0007165
Lapu5g00824 1059 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 52 746 IPR044974 GO:0006952
Lapu5g00824 1059 Pfam Leucine Rich Repeat 638 655 IPR011713 -
Lapu5g00824 1059 Gene3D - 46 217 IPR035897 -
Lapu5g00824 1059 Gene3D - 218 380 IPR027417 -
Lapu5g00824 1059 Pfam TIR domain 52 219 IPR000157 GO:0007165
Lapu5g00824 1059 ProSiteProfiles TIR domain profile. 50 216 IPR000157 GO:0007165
Lapu5g00824 1059 Pfam NB-ARC domain 235 463 IPR002182 GO:0043531
Lapu5g00824 1059 SUPERFAMILY Toll/Interleukin receptor TIR domain 45 194 IPR035897 -
Lapu5g00824 1059 Gene3D - 387 471 IPR042197 -
Lapu5g00824 1059 Gene3D Ribonuclease Inhibitor 752 945 IPR032675 -
Lapu5g00824 1059 Gene3D Ribonuclease Inhibitor 576 751 IPR032675 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu5g00824 Lapu-Chr5 8535435 8546342 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00824 727 886 WRKY Transcription Factor Family AT4G12020 35.912 2.97e-16 82.4