Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00823 ATGGTGAATAATAAATCAGGGCTTAAACGGTTTTGGAACCGTTGGGGTGGTCGATCGTCGTCTTCTATCATCAATTCACCGCGATCCACTTCTTCTTCCTATCACTCCTCCGACTCAATCCATAACCATTACTATAGATACGATGTATTTATCAGTTTCAGAGGTCCTGACACCCGCAACTCTTTCGTTGATCATCTCTACTCTCATCTCCTCCGAAAGGGCATTTTCATCTTTAAGGATGACGACACACTACAGAAAGGAGAATCCATTTCCCCACAGCTTCTACAAGCAATTCAACATTCACGGCTTTCTATTATTGTCTTTTCCAAAAATTATGCTTCCTCAACTTGGTGTTTAGACGAAATGGCCGCCATAGCTTATTGCAAACAACGGTCAAACCACACTGTTTTCCCCATTTTCTATGATGTAGATCCATCTCATGTACGGCATCAGAATGGGGTATACAAAAATGACTTTGTTTCACACAGATCGAAATTCAAAAAAAATCGGGATAAGGTTCGTCGATGGCAGAGGGCTATGACGGATTTGGCCGATTCAGCTGGTTGGGATGTCAGGGACAAGCCAGAGTTTGAACAGATTCAAAATATTGTTCATGCAGTAATTAAAAAATTAGGCCATAAGTTTTCATGGTTTGTTGATGATCTTATTGGGATGCAACCACGTGTACAAGCATTAGAAGATAAATTAAGATTAAGTTCAAACAGTGATGATGTTCAAGTTTTAGGAATTTGGGGAATGAATGGAATAGGAAAGACGACTCATGCTGCTGTCTTGTATGATAAAATCTCCCATAGATTTGATGCTTGTTGTTTCATTGAGAATGTGAGCAAACTTTATAGGGATGGTGGCCATACTGCTGTACAGAAAGAAATTATTTATCAAACTTTACGTGAAAAAAGTCTAGATATGAGTAGTCCTATTGAAATATCAGGGATTGTAGAAAATAGACTACACAACATAAGGGTTCTCATTGTTCTTGACAATGTCGATGAATTAGAGCAATTGGAAAAATTAGCCGTAAAACCTAAATTGCTTTTGAAGGGAAGTAGAATGGTTATTACCACCACGGATGAGCATATTCTGAAAGTGTACGAAGGTGATGTATTGATACACAAGGTTTCATTATTGAATGATAAGGATGCTTGTGAATTGTTTTGTAAAAAGGCCTTCAAAAGTGAAGAGCAAAGCAGTAGTTGCGCGGCTTTGATTCCTGAGGTACTGAAATATGCCCAATGTCTTCCATTGGCAATTAGAGTGTTGGGTTCTTTCTTGTGTACTCGAGATGCTGTTGAATGGAGAGATGTGTTGAATAGATTGGAGAATAGTCCAGATGATAAAATTATGAATGTGCTTCAAATAAGTGTTGATGGACTACACCATGAGGAAAAGCAAATATTTTTACACATTGCTTGTTTCTTTAGAGGGGAGAGGGAGGATTATGTTAAGCGAATTCTAGACTGTTGTGGGTTATACCCTCACATTGGAATTTCAAGACTCATTGAGAAATCACTCATTACTATTAGCAATGAAGAAATTCTTATGCATGAATTGTTACAAGAATTGGGAAAGAAAATTGTTCGCGACCAGTCTCCCGAGGAGCCAGGATCATGGAGTAGAATATGGCTTCTTAAAGACTTCTGTCAAGTCTTGACAACAGAAACGGGAACAGAGAAGGTGAAAGCTATAGTTTTAGATAGAAAAGAAGAAATCTCCGAATGTAGGGTTGATGGATTATCAAAAATGAAGAAGCTTACATTACTCATATTGTATCACAAACAATTTTCAGGAAACCTGGAGTCTCTTTCTGACAAGCTGCGATATCTTCTGTGGCATGATTATCCTTTTGCTTCTCTGCCACCATATTTTACAGCCTCTAATCTCGTGGAATTGAATATGCCCAACAGTCACATCAAACGTTTATGGGAAGTCCGAAAGAGTTGTCCCAACTTGAAAAGGATTGATTTAAGCAACTCCAAGCACCTGATCGAGACTCCGGATTTTTCTAGAATCATAAAACTTGAAAGGCTAGATCTTTCTGGATGTACAAGTTTATCACATGTTCATTCATCAATTGGACTTCTTAAGAAGCTTGCTTTCGTGAATTTACGAAATTGTCACAATCTAGTTATCATTGACTTTGGTCGTGTAGGTAACATGAGCTCTCTGAGAGTTCTACATCTTTCGGGTTGTACTAAACTTGAAAGCACGCCAGATTTTACAGGGGCGACATATCTTGAGTACCTTGACATGGATGAATGTACAAGTTTATCCACTATTCATGAATCTATTGGAGTCCTTTCAAACCTTACATTCTTGAGTTTGAGAGGATGCATAAAGCTTGTTAGTATACCAAAAAATATTAATTCCTTGGTATCTCTTCAAACTCTAGATTTATGCGGCTGTTTGAACCTTACAGATCTGCAACCAAGACCAGCTTCTCCATCCCATTTGAAATCTTTGATTTTTCTGGACCTAAGCTTTTGCAATCTACAAGAAGTACCTCATGCTATTGGAGAGTTAAGGTTTTTGGAAAGACTGAATCTGCAGGGAAACAAATTTGTTTCAGTACCTGATTCCTTCAAGGGGCTTTATTGTCTAGCATATTTAAACTTGTCTCATTGTCATAAGCTTAAATCTTTGCCTGGCCTTCCAATTGAAGGAGCTACATCAGGGGGGAAGTATTTTAAAACAGTATCCGGATCTCGTGATCATAGGTCCGGCTTATATCTTTATTATTGTCCCAAGATGGGTCACTGGAGTTGGGAACTTGCATGGCTTTTCAGACTAATTAAGGAACCCAGTAATTTTCGGTGTGGCTGTGACATTGTTGTTCCTTGGAATTTGGCATTTCCAAGGTGGTTCGGTGAAATATTTAGAAGGAATTCAATCATAAGGATAATTCAATGTGATAATGACAACTGGATTGGCTTTGCTTTTTTTGTTATATTTGAGCAAAACAGTGGTGATGCGGTTGTTAGATCTCCTTCAGACTGTTCATTTTCTTCATCGCACCCGTTTTATCTTTCTTTTGAGAGTGAATACACAGAAGAGTACTTTGATATGCGACTTAACTTGAAGTTGGATCAGACAAATGGGTCTACACATATTTGGATAATTTACATCTCTCGAGAACATTGTCATTTTGTGAAAACTGGAGCGCATATCACATTTAAAGCTCAACCAAGTGTTAAGATCAATAAATGGTGGATGAGAAGAATACTCAAGCAAGATGTACATGACTTTAGAGGGTTCAAACAAGGATTATTTTCCCCATTAAATCATAATCTTGTCCACTTTGATTATGTCAAAAAAAGCAACAGTAGCTCAGGTCCCAAAATCCAGCTTCCTTACAATTGGCTTGTCACAGAAGAAGAGGAAGTTGAGAATATTGATGCGAAGGCAAAAGAAAATAATCTCTCCAATACGGGGCTTTAA 3456 0.3805 MVNNKSGLKRFWNRWGGRSSSSIINSPRSTSSSYHSSDSIHNHYYRYDVFISFRGPDTRNSFVDHLYSHLLRKGIFIFKDDDTLQKGESISPQLLQAIQHSRLSIIVFSKNYASSTWCLDEMAAIAYCKQRSNHTVFPIFYDVDPSHVRHQNGVYKNDFVSHRSKFKKNRDKVRRWQRAMTDLADSAGWDVRDKPEFEQIQNIVHAVIKKLGHKFSWFVDDLIGMQPRVQALEDKLRLSSNSDDVQVLGIWGMNGIGKTTHAAVLYDKISHRFDACCFIENVSKLYRDGGHTAVQKEIIYQTLREKSLDMSSPIEISGIVENRLHNIRVLIVLDNVDELEQLEKLAVKPKLLLKGSRMVITTTDEHILKVYEGDVLIHKVSLLNDKDACELFCKKAFKSEEQSSSCAALIPEVLKYAQCLPLAIRVLGSFLCTRDAVEWRDVLNRLENSPDDKIMNVLQISVDGLHHEEKQIFLHIACFFRGEREDYVKRILDCCGLYPHIGISRLIEKSLITISNEEILMHELLQELGKKIVRDQSPEEPGSWSRIWLLKDFCQVLTTETGTEKVKAIVLDRKEEISECRVDGLSKMKKLTLLILYHKQFSGNLESLSDKLRYLLWHDYPFASLPPYFTASNLVELNMPNSHIKRLWEVRKSCPNLKRIDLSNSKHLIETPDFSRIIKLERLDLSGCTSLSHVHSSIGLLKKLAFVNLRNCHNLVIIDFGRVGNMSSLRVLHLSGCTKLESTPDFTGATYLEYLDMDECTSLSTIHESIGVLSNLTFLSLRGCIKLVSIPKNINSLVSLQTLDLCGCLNLTDLQPRPASPSHLKSLIFLDLSFCNLQEVPHAIGELRFLERLNLQGNKFVSVPDSFKGLYCLAYLNLSHCHKLKSLPGLPIEGATSGGKYFKTVSGSRDHRSGLYLYYCPKMGHWSWELAWLFRLIKEPSNFRCGCDIVVPWNLAFPRWFGEIFRRNSIIRIIQCDNDNWIGFAFFVIFEQNSGDAVVRSPSDCSFSSSHPFYLSFESEYTEEYFDMRLNLKLDQTNGSTHIWIIYISREHCHFVKTGAHITFKAQPSVKINKWWMRRILKQDVHDFRGFKQGLFSPLNHNLVHFDYVKKSNSSSGPKIQLPYNWLVTEEEEVENIDAKAKENNLSNTGL* 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00823 1151 Gene3D - 382 466 IPR042197 -
Lapu5g00823 1151 Gene3D - 44 216 IPR035897 -
Lapu5g00823 1151 PRINTS Disease resistance protein signature 247 262 - -
Lapu5g00823 1151 PRINTS Disease resistance protein signature 323 337 - -
Lapu5g00823 1151 PRINTS Disease resistance protein signature 724 740 - -
Lapu5g00823 1151 PRINTS Disease resistance protein signature 417 431 - -
Lapu5g00823 1151 ProSiteProfiles TIR domain profile. 45 211 IPR000157 GO:0007165
Lapu5g00823 1151 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 476 IPR027417 -
Lapu5g00823 1151 Gene3D Ribonuclease Inhibitor 573 750 IPR032675 -
Lapu5g00823 1151 Gene3D Ribonuclease Inhibitor 751 938 IPR032675 -
Lapu5g00823 1151 Pfam Leucine Rich Repeat 633 649 IPR011713 -
Lapu5g00823 1151 Pfam NB-ARC domain 232 455 IPR002182 GO:0043531
Lapu5g00823 1151 SUPERFAMILY Toll/Interleukin receptor TIR domain 36 189 IPR035897 -
Lapu5g00823 1151 Gene3D - 218 376 IPR027417 -
Lapu5g00823 1151 Pfam TIR domain 47 213 IPR000157 GO:0007165
Lapu5g00823 1151 SMART till_3 46 186 IPR000157 GO:0007165
Lapu5g00823 1151 FunFam Disease resistance protein (TIR-NBS-LRR class) 43 213 - -
Lapu5g00823 1151 SUPERFAMILY L domain-like 522 889 - -
Lapu5g00823 1151 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 740 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00823 Lapu-Chr5 8519230 8526315 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00823 725 888 WRKY Transcription Factor Family AT4G12020 34.426 2.07e-13 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00823 - - vra:106778496 1830.84