Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00821 ATGGTGAAAAGTAAATCAGGGCTTAAACGGTTTTGGGATCGGTTGGGTGGTCGATCGTCCTCTTCTAGCATCAATTCATCCTCTTCCACTTCTTCTTCCTATCACTCCTTCGACACCATCCATCACGAAAACTATAGATACGATGTGTTTATCAGTTTCAGAGGTCCTGACACCCGCAACTCTTTTGTTGATCATCTCTCCTCTCAGCTCCTCCGAAAAGGCATCTTCATCTTTAAGGATGACCAGAAGCTTCACAAAGGAGAATCCATCTCCCCACAGCTTCTGCAAGCAATTCAACATTCACGGCTTTCTATTATTGTCTTTTCCAAAAATTATGCTTCCTCCACTTGGTGTTTAGACGAAATGGCCGCTATAGCTTATTGCAAACAACGATCAAACCACACTGTTTTCCCCATTTTCTATGATGTAGATCCATCTCATGTACGACATCAGAATGGGGTATACAAGAATGATTTTGTTTTACACAGATGTAAATTCTTAAAAGATTGGGACAAGGTTCGTGGATGGGAGAGGGCTATGACATATTTGGCCAATTCAGCTGGTTGGGATGTCAGGGACAAATCAGAATCTGAAGTAATTGAAGATATTGCTCAAAAGGTAATAAAAAAATTGGGTCATAAATTCTCTGGGTTTGCTGATGACCTTATTGGGATCCAAGCACGTGTAGAAGTATTAGAAGATAAATTAAGATTAAGTTCAAACAGTGATGATGTCCAAGTTTTAGGAATTTGGGGAATGAATGGAATAGGAAAGACCACTCATGCGGCTGTCCTGTATGACAAAATCTCTCATAGGTTTGATGGCTGTTGCTTCATTGAGGATGTGAGCAAAATTTATAGGAATGGGGAGAGGGAGGATTATGTTAAGCGAATTCTTGAGTGTTTTGAATTACACCCTCACATTGGAATTAAAAGACTCATTGAGAAATCGCTCATCACTATTAGTAATGAAGAAATTCTTATGCATGAATTGTTACAAGAATTGGGAAAGAAGATTGTTCGCGACCAATCTCCCGAGGAACCAGGATCATGGAGTAGAATATGGCTTCATAAAGACTTCTTTCAAGTCTTGATGACAGAAACGGGAACAGAGAAGGTGAAAGCCATAGTTGTAAATAGAAAAGAAGAAATCTCGGAATGTAGTGTTGATGGATTGTCAAAAATGAAGGAGCTAACATTACTCATATTATATCATACAAAAGTTTCAGGAAGCCTGGAGTTTCTTTCTGATAGGCTGCGATATCTTTTGTGGCATGATTATCCTTTTGCTTCTCTGCCTCCATACTTTACAGCCTCCAATCTTGTGGAGTTGAATATGCCTAACAGTCATATCAAACGTTTATGGGAAGGCAGCAAGAGCTGTTCTAACTTGAAAAGGATTGATTTAAGTAACTCTAAGCACTTGACTGAGACTCCAGATTTTTCTAGAATCATACAACTTGAAAGGTTAGATCTTTCTGGATGTACAAGTTTATCATATGTCCATCCATCAATTGGACTTCTTAAGAGGCTTGCTTTCGTGAATTTTCGAAATTGTTGCAATCTAGTTATCATTGACTTTGGCAGTGTAGGTAACATGGGTTCTCTGAGAGTTTTACATCTCTCGGGTTGTACTAAACTTGAAAGCACCCCAGATTTTACGAGGGCAACACATCTTGAGTACCTTAACATGGATGAATGTACGAGTTTATCCAATATTCGTGAATCTATTGGAGTCCTTTCAAACCTTACATTCTTGAGTATGAGAGGCTGCAAAAACCTTGAACCTTGTAATTTTCGGTGTGGCTTTGACATTGTCGTTCCTTCGGAATTGACAATTGGAATTTCGCTCGGTGAAATATTTAGAGGGGATTCAATTATAAGGGTAGCTCAATGTGATACGAGTGACAACTGGATTGGCTTTGTGTTTGGTGTTATATTTGAGCTAAACAATGGTGATTCAGATGTTAGATCTCCTCCACACTGTTCATTTTCTTCATCGCATTCGATTTGTCTTTCTTTTGAAAGTGAATACACAGAAGAATACTTTGATATGCAACTCAATATGGAGGCATATCAGACAGATGGATCTACATATATTTGGATAATTTACATCAGTCGGGAACACTGTCATTTTGAGAAAACAGGAGCGCATATCACATTTAAAGCGCATCCAAATGTTACGATCCATGAATGGGGGATGAGAAGAATACTGAAGCCTGATATACATAACATTAGAAGGTTCGAACAAGAATTATTCTCCCCTTTAAATCATAATCATGTGGACATTGATTATGTAAAGAAAAACAACTGTAGTTCAGGGTCTAAAATCCGGCTTCCTTACAATTGGTTCCTAACGGAAGAAGATGAAGTTGAGAATATTGATGCAAAGGCAAAAGAAAATAATATCTCCAATGCGGGGCTTTAA 2427 0.3844 MVKSKSGLKRFWDRLGGRSSSSSINSSSSTSSSYHSFDTIHHENYRYDVFISFRGPDTRNSFVDHLSSQLLRKGIFIFKDDQKLHKGESISPQLLQAIQHSRLSIIVFSKNYASSTWCLDEMAAIAYCKQRSNHTVFPIFYDVDPSHVRHQNGVYKNDFVLHRCKFLKDWDKVRGWERAMTYLANSAGWDVRDKSESEVIEDIAQKVIKKLGHKFSGFADDLIGIQARVEVLEDKLRLSSNSDDVQVLGIWGMNGIGKTTHAAVLYDKISHRFDGCCFIEDVSKIYRNGEREDYVKRILECFELHPHIGIKRLIEKSLITISNEEILMHELLQELGKKIVRDQSPEEPGSWSRIWLHKDFFQVLMTETGTEKVKAIVVNRKEEISECSVDGLSKMKELTLLILYHTKVSGSLEFLSDRLRYLLWHDYPFASLPPYFTASNLVELNMPNSHIKRLWEGSKSCSNLKRIDLSNSKHLTETPDFSRIIQLERLDLSGCTSLSYVHPSIGLLKRLAFVNFRNCCNLVIIDFGSVGNMGSLRVLHLSGCTKLESTPDFTRATHLEYLNMDECTSLSNIRESIGVLSNLTFLSMRGCKNLEPCNFRCGFDIVVPSELTIGISLGEIFRGDSIIRVAQCDTSDNWIGFVFGVIFELNNGDSDVRSPPHCSFSSSHSICLSFESEYTEEYFDMQLNMEAYQTDGSTYIWIIYISREHCHFEKTGAHITFKAHPNVTIHEWGMRRILKPDIHNIRRFEQELFSPLNHNHVDIDYVKKNNCSSGSKIRLPYNWFLTEEDEVENIDAKAKENNISNAGL* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00821 808 Gene3D Ribonuclease Inhibitor 525 602 IPR032675 -
Lapu5g00821 808 Pfam Leucine Rich Repeat 440 459 IPR011713 -
Lapu5g00821 808 SUPERFAMILY L domain-like 345 595 - -
Lapu5g00821 808 Pfam NB-ARC domain 230 342 IPR002182 GO:0043531
Lapu5g00821 808 Pfam TIR domain 47 214 IPR000157 GO:0007165
Lapu5g00821 808 ProSiteProfiles TIR domain profile. 45 211 IPR000157 GO:0007165
Lapu5g00821 808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 336 IPR027417 -
Lapu5g00821 808 PRINTS Disease resistance protein signature 247 262 - -
Lapu5g00821 808 PRINTS Disease resistance protein signature 531 547 - -
Lapu5g00821 808 FunFam Disease resistance protein (TIR-NBS-LRR class) 43 213 - -
Lapu5g00821 808 SMART till_3 46 186 IPR000157 GO:0007165
Lapu5g00821 808 SUPERFAMILY Toll/Interleukin receptor TIR domain 37 189 IPR035897 -
Lapu5g00821 808 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 533 595 IPR044974 GO:0006952
Lapu5g00821 808 Gene3D - 44 217 IPR035897 -
Lapu5g00821 808 Gene3D - 218 342 IPR027417 -
Lapu5g00821 808 Gene3D Ribonuclease Inhibitor 355 524 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00821 Lapu-Chr5 8472954 8477691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00821 273 595 WRKY Transcription Factor Family AT4G12020 33.518 2.29e-42 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00821 - - vra:106778496 517.694