Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00816 ATGAGCCCGAGCCCGAGGCTCACTTTAGAAGCTGGGCCTGCTTCTCCTTCATCCGGTGATGATACTAAAACAGAAGCACCGTCACCTAAGAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACGATACCGATCGGTGACGTGGATGGATCTAAGAGCAAAGGAGAGACGTATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAAAAGCCCATCAAAGGCTCCCCTTACCCAAGGGGATATTACCGATGCAGCAGTTCAAAGGGGTGTCCCGCAAGGAAGCAAGTTGAGCGAAGCCGTGTGGACCCCACAAAGCTCATAGTCACCTACGCCAACGACCACAACCACTCCGTCCCCCTCCCCAAATCAAATACCTCCGCCGTTTCCGCCGCCTCCTCGCCGGCCGAGTCCGCCGCAAGGTTCACGCCGGAGGAAGAGATGGCCGTGTTCGCAACTCACTACGATTTTGAACTCGCCGGCGACGCGGCGGTTCTGCTCAGCCACCACCACTTTCGGTGGTTCGACGACGTGGCGTCAACCGGTGTCCTCGAGAGCCCGATCTGCGGCGAGGTGGATGACGTGGCGATGCCGATGAGGGAGGAGGACGAGTCGCTCTTCGCCGATCTCGACGAGTTGCCGGAGTGCTCGGTGGTTTTCCGGCGGAGGAATATTCCGAGGAGCAGCGCGATCCGGTGCGGCGGCATCACAGGATAA 717 0.5914 MSPSPRLTLEAGPASPSSGDDTKTEAPSPKKRREMKKRVVTIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLIVTYANDHNHSVPLPKSNTSAVSAASSPAESAARFTPEEEMAVFATHYDFELAGDAAVLLSHHHFRWFDDVASTGVLESPICGEVDDVAMPMREEDESLFADLDELPECSVVFRRRNIPRSSAIRCGGITG* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00816 238 SMART WRKY_cls 59 119 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g00816 238 SUPERFAMILY WRKY DNA-binding domain 55 120 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g00816 238 MobiDBLite consensus disorder prediction 1 65 - -
Lapu5g00816 238 Pfam WRKY DNA -binding domain 61 117 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g00816 238 ProSiteProfiles WRKY domain profile. 60 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu5g00816 238 Gene3D WRKY domain 47 121 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu5g00816 238 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 218 IPR044810 GO:0003700
Lapu5g00816 238 FunFam WRKY transcription factor 65 46 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00816 Lapu-Chr5 8395554 8398071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00816 13 225 WRKY Transcription Factor Family AT3G58710 52.381 5.67e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu5g00816 WRKY 7.3e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00816 - - vra:106778551 445.662