Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00811 ATGGACGAAGATTACGGCTACAGAAGGAAGGCCAAGATTGCACTCGTCGCAGTTATGGTCCTCGCTTCCCTCGCCGTCTTTGCCTTGCTCGTTGCCTTTGCTTACTACTGCTACATTCTCAACAAGGTCTCCAACCGCCGCAAAAGCCTGAAAAAAGTTGAAGATGCTAACCTTAATGAGAATAGTGACTTTGCAAATCTGCAAGTTATTGCCGAGAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTGCATTCTGCCACAGGGGGCTTCAGCAAATCGAATGTCATTGGTCATGGTGGATTTGGACTTGTTTATCGGGGAGTGCTCAATAATGGAAGGAAAGTTGCAATTAAATTCATGGATCAGGCTGGAAAGCAAGGGGAAGAAGAATTTAAAGTGGAGGTAGAATTGCTAAGCCGGTTGCATTCTCCGTATCTGTTGGCATTGCTTGGGTACTGCTCTGATAGTAATCATAAATTGCTGGTGTATGAATTTATGGCAAATGGTGGACTGCAGGAACATCTTTATCCTGTTAGCATTGATTTTCTCGTAGATTCTATTATTACACCCATAAAGTTGGATTGGGAAACTCGATTAAGAATAGCACTAGAAGCTGCTAGGGGGTTGGAATATCTTCATGAGCATGTTAGTCCCCCAGTTATTCACAGAGATTTTAAGAGCAGTAACATACTCTTGGATAAGAAATTTCATGCCAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAGCTGGTGGACATGTTTCAACTCGAGTTTTGGGCACCCAAGGATATGTTGCTCCCGAATATGCACTAACAGGGCATTTAACAACAAAATCGGATGTGTACAGTTATGGTGTTGTACTTTTGGAGCTGCTCACTGGCCGAGTGCCAGTAGATATGAAGAGACCTCCAGGAGAAGGTGTTCTTGTTTCTTGGGCTCTGCCTCTTCTGACTGATAGAGAAAAGGTTGTAAAGATTATGGATCCTTCATTAGAGGGACAGTACTCCATGAAAGAGGTTGTCCAGGTGGCTGCAATTGCAGCGATGTGTGTGCAACCAGAGGCAGATTATCGGCCTCTCATGGCAGATGTTGTGCAGTCATTGGTTCCTCTGGTGAAGACTCAAAGGTCCCCTTCAAAGGTAGGAAGCTGCTCCAGTTTCCACTCTCCTAAGTTGTCCCCCGGCCCAACATCTAGTTAG 1209 0.4475 MDEDYGYRRKAKIALVAVMVLASLAVFALLVAFAYYCYILNKVSNRRKSLKKVEDANLNENSDFANLQVIAEKGLQVFTFKQLHSATGGFSKSNVIGHGGFGLVYRGVLNNGRKVAIKFMDQAGKQGEEEFKVEVELLSRLHSPYLLALLGYCSDSNHKLLVYEFMANGGLQEHLYPVSIDFLVDSIITPIKLDWETRLRIALEAARGLEYLHEHVSPPVIHRDFKSSNILLDKKFHAKVSDFGLAKLGPDRAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRPPGEGVLVSWALPLLTDREKVVKIMDPSLEGQYSMKEVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVKTQRSPSKVGSCSSFHSPKLSPGPTSS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00811 402 SUPERFAMILY Protein kinase-like (PK-like) 72 371 IPR011009 -
Lapu5g00811 402 ProSitePatterns Protein kinases ATP-binding region signature. 96 118 IPR017441 GO:0005524
Lapu5g00811 402 FunFam Receptor-like serine/threonine-protein kinase ALE2 166 388 - -
Lapu5g00811 402 Pfam Protein tyrosine and serine/threonine kinase 93 371 IPR001245 GO:0004672|GO:0006468
Lapu5g00811 402 FunFam Serine/threonine-protein kinase PBS1 57 165 - -
Lapu5g00811 402 MobiDBLite consensus disorder prediction 380 402 - -
Lapu5g00811 402 ProSiteProfiles Protein kinase domain profile. 90 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu5g00811 402 CDD STKc_IRAK 96 374 - -
Lapu5g00811 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Lapu5g00811 402 Gene3D Phosphorylase Kinase; domain 1 50 165 - -
Lapu5g00811 402 PANTHER OS07G0668900 PROTEIN 61 380 - -
Lapu5g00811 402 Gene3D Transferase(Phosphotransferase) domain 1 166 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00811 Lapu-Chr5 8329386 8334544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00811 1 397 Receptor kinase-like Gene Family AT3G58690 75.819 0.0 608
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lapu5g00811 PK_Tyr_Ser-Thr 8.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00811 - - gmx:100804893 735.332